RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 BAXQ07812 192 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 TOMM20LQ6UXN7 152 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 OR1P1Q8NH06 330 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 TXN2Q99757 166 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 SCGB1D2O95969 90 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 NPY1RP25929 384 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 VAMP2P63027 116 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 COMMD7Q86VX2 200 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 SAT2Q96F10 170 aaPredicted RBP10.32□□□□□ -0.76
CXCR4-203ENST00000466288 SCRT2Q9NQ03 307 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 RABAC1Q9UI14 185 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
CXCR4-203ENST00000466288 MARCH11A6NNE9 402 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 K7EQG2 157 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 WRBO00258 174 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 MED6O75586 246 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 IGHV3-48P01763 117 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 ZNF266Q14584 549 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 RNF212Q495C1 297 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 OR51H1Q8NH63 302 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 RNASE11Q8TAA1 199 aaKnown RBP10.31□□□□□ -0.76
CXCR4-203ENST00000466288 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 ARV1Q9H2C2 271 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 LYRM2Q9NU23 88 aaPredicted RBP10.31□□□□□ -0.76
CXCR4-203ENST00000466288 AGRNO00468 2067 aa10.31□□□□□ -0.76
CXCR4-203ENST00000466288 RAB5CP51148 216 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 FAM210BQ96KR6 192 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 RCL1Q9Y2P8 373 aaKnown RBP10.3□□□□□ -0.76
CXCR4-203ENST00000466288 MT-CO2P00403 227 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 SEC11BP0C7V7 166 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 AKR1C2P52895 323 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 ERVK-16P61578 105 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 GPR146Q96CH1 333 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
CXCR4-203ENST00000466288 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 KRBOX1C9JBD0 128 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 GNG7O60262 68 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 LPAR6P43657 344 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 SMIM8Q96KF7 97 aa10.29□□□□□ -0.76
CXCR4-203ENST00000466288 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
CXCR4-203ENST00000466288 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 KRASP01116 189 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 P0C879 139 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 SULT1A2P50226 295 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
CXCR4-203ENST00000466288 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.28□□□□□ -0.76
CXCR4-203ENST00000466288 SYNGR2O43760 224 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 G6PCP35575 357 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 POLR2GP62487 172 aaKnown RBP eCLIP10.27□□□□□ -0.77
CXCR4-203ENST00000466288 RPL7L1Q6DKI1 246 aaKnown RBP10.27□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF600Q6ZNG1 722 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 STX12Q86Y82 276 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 CIB3Q96Q77 187 aaPredicted RBP10.27□□□□□ -0.77
CXCR4-203ENST00000466288 FKBP11Q9NYL4 201 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 CACNG5Q9UF02 275 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 PRNDQ9UKY0 176 aa10.27□□□□□ -0.77
CXCR4-203ENST00000466288 SSSCA1O60232 199 aa10.26□□□□□ -0.77
CXCR4-203ENST00000466288 IGKV1-5P01602 117 aa10.26□□□□□ -0.77
CXCR4-203ENST00000466288 CAV2P51636 162 aa10.26□□□□□ -0.77
CXCR4-203ENST00000466288 AARDQ4LEZ3 155 aa10.26□□□□□ -0.77
CXCR4-203ENST00000466288 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
CXCR4-203ENST00000466288 GNPNAT1Q96EK6 184 aaPredicted RBP10.26□□□□□ -0.77
CXCR4-203ENST00000466288 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
CXCR4-203ENST00000466288 STRAPQ9Y3F4 350 aaKnown RBP10.26□□□□□ -0.77
CXCR4-203ENST00000466288 A0A1W2PS18 150 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 UMAD1C9J7I0 102 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 NPPCP23582 126 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 SULT1A1P50225 295 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 HBG1P69891 147 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 HBG2P69892 147 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
CXCR4-203ENST00000466288 TMED6Q8WW62 240 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 NEU1Q99519 415 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
CXCR4-203ENST00000466288 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
CXCR4-203ENST00000466288 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 CRYBB3P26998 211 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 NPBWR1P48145 328 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 EMP1P54849 157 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 PAX9P55771 341 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 H2BFWTQ7Z2G1 175 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 OR52E5Q8NH55 327 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms