RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SLC16A13Q7RTY0 426 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 MARC2Q969Z3 335 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 C17orf77Q96MU5 243 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 OVOL2Q9BRP0 275 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 C20orf85Q9H1P6 137 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 MS4A6AQ9H2W1 248 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 TUBA4BQ9H853 241 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 EDA2RQ9HAV5 297 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 NUDT15Q9NV35 164 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 RCL1Q9Y2P8 373 aaKnown RBP3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 TMED3Q9Y3Q3 217 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 KMT2AQ03164 3969 aa3.52□□□□□ -1.85
EXOSC3-204ENST00000465860 VPS13DQ5THJ4 4388 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 FAM240BA0A1B0GVZ2 78 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 CORTO00230 105 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 PTTG1O95997 202 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 IL4P05112 153 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 RPL35AP18077 110 aaKnown RBP3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 DEFB1P60022 68 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 YPEL3P61236 119 aaPredicted RBP3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 ARL16Q0P5N6 197 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 OR2F1Q13607 317 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 LEMD1Q68G75 181 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 RNASEH2CQ8TDP1 164 aaKnown RBP3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 DCANP1Q8TF63 244 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 SPAG8Q99932 426 aaPredicted RBP3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 C11orf1Q9H5F2 150 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 U3KQ87 197 aa3.51□□□□□ -1.85
EXOSC3-204ENST00000465860 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 C7orf66A4D0T2 115 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 OR4C46A6NHA9 309 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PRSS47A8MTI9 375 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 FAM90A26D6RGX4 464 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 K7EQG2 157 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 BUB3O43684 328 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 SSSCA1O60232 199 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PRAF2O60831 178 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 SIX6O95475 246 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 IFNA4P05014 189 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 GIG44P09565 113 aaPredicted RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PRB4P10163 310 aaPredicted RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 SLC25A4P12235 298 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 NPPCP23582 126 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 GPX4P36969 197 aaPredicted RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 P2RY1P47900 373 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 IL15RAQ13261 267 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 RGS21Q2M5E4 152 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 IAH1Q2TAA2 248 aaPredicted RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 DEFB135Q30KP9 77 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 SPANXN5Q5MJ07 72 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 CASC10Q5T4H9 136 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 ZFAND6Q6FIF0 208 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 LAMTOR1Q6IAA8 161 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 CFAP161Q6P656 301 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 C16orf54Q6UWD8 224 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 NRARPQ7Z6K4 114 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 THAP8Q8NA92 274 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 COQ8AQ8NI60 647 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 MUC7Q8TAX7 377 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 RNF125Q96EQ8 232 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 C1QTNF4Q9BXJ3 329 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 GPN1Q9HCN4 374 aaPredicted RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PPP1R14DQ9NXH3 145 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PSENENQ9NZ42 101 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 GSKIPQ9P0R6 139 aa3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 PAIP2BQ9ULR5 123 aaKnown RBP3.5□□□□□ -1.85
EXOSC3-204ENST00000465860 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 TRAV30A0A087WSZ9 112 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 LOC102724200A0A096LPH7 203 aaPredicted RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 KNCNA6PVL3 124 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 METTL15P1P0C7V9 234 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 ZNF688P0C7X2 276 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 RD3LP0DJH9 198 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 NKX2-1P43699 371 aaPredicted RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 DEFB131AP59861 70 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 LYZP61626 148 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 RRAS2P62070 204 aaPredicted RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 OR8G2PQ6IF36 304 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 TMEM14EPQ6UXP3 125 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 ACOT7LQ6ZUV0 252 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 C12orf45Q8N5I9 185 aaPredicted RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 NEXN-AS1Q8NBZ9 246 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 STXBP6Q8NFX7 210 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 ZNF431Q8TF32 576 aaPredicted RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 Q8WTZ3 238 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 TMED6Q8WW62 240 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 SMIM8Q96KF7 97 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 METTL26Q96S19 204 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 TRGV9Q99603 122 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 GINS3Q9BRX5 216 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 PBDC1Q9BVG4 233 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 GGTLC1Q9BX51 225 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 RABAC1Q9UI14 185 aa3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 STRAPQ9Y3F4 350 aaKnown RBP3.49□□□□□ -1.85
EXOSC3-204ENST00000465860 DNAH10Q8IVF4 4471 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms