RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ZMAT4Q9H898 229 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 DNAJC4Q9NNZ3 241 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 U3KQK5 164 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 KNCNA6PVL3 124 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 FGL1Q08830 312 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 PSMG4Q5JS54 123 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 C10orf113Q5VZT2 155 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 S100A7AQ86SG5 101 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 OR2T35Q8NGX2 323 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 ASB13Q8WXK3 278 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 C17orf77Q96MU5 243 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 ATP5SQ99766 215 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.94
CHPF2-202ENST00000465601 WFDC1Q9HC57 220 aa9.15□□□□□ -0.94
CHPF2-202ENST00000465601 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
CHPF2-202ENST00000465601 SNRPD3P62318 126 aaKnown RBP9.14□□□□□ -0.95
CHPF2-202ENST00000465601 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 OR1L4Q8NGR5 311 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 LINC00052Q96N35 136 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 GPR82Q96P67 336 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 SEPSECSQ9HD40 501 aaKnown RBP9.14□□□□□ -0.95
CHPF2-202ENST00000465601 RETNQ9HD89 108 aa9.14□□□□□ -0.95
CHPF2-202ENST00000465601 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 SOCS3O14543 225 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 IFNA5P01569 189 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 RPL7P18124 248 aaKnown RBP9.13□□□□□ -0.95
CHPF2-202ENST00000465601 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
CHPF2-202ENST00000465601 ID1P41134 155 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 GCSAMLQ5JQS6 135 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 ZNF709Q8N972 641 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 SCGB1C1Q8TD33 95 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 C16orf92Q96LL3 132 aa9.13□□□□□ -0.95
CHPF2-202ENST00000465601 G3V3Q6 166 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 SNRPCP09234 159 aaKnown RBP9.12□□□□□ -0.95
CHPF2-202ENST00000465601 MEOX2P50222 304 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 APOC4P55056 127 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 DEFB1P60022 68 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 STHQ8IWL8 128 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 AQP10Q96PS8 301 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 PFDN5Q99471 154 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 RNF24Q9Y225 148 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
CHPF2-202ENST00000465601 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 C17orf112F2Z3M2 114 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 SMLR1H3BR10 107 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 ISLRO14498 428 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
CHPF2-202ENST00000465601 PSMB3P49720 205 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 INO80EQ8NBZ0 244 aaPredicted RBP9.11□□□□□ -0.95
CHPF2-202ENST00000465601 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 CSTL1Q9H114 145 aa9.11□□□□□ -0.95
CHPF2-202ENST00000465601 A0A087X0K7 114 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 TRAV8-2A0A0B4J237 113 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 UBE2CO00762 179 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 FAM78BQ5VT40 261 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 SAMD13Q5VXD3 122 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 SPATA31B1PQ5VZV4 182 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
CHPF2-202ENST00000465601 BPIFA4PQ86YQ2 179 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 PARD6GQ9BYG4 376 aaPredicted RBP9.1□□□□□ -0.95
CHPF2-202ENST00000465601 KCNIP2Q9NS61 270 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 TNFSF18Q9UNG2 199 aa9.1□□□□□ -0.95
CHPF2-202ENST00000465601 RNF222A6NCQ9 220 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 H3BTX0 84 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 HLA-DMBP28068 263 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 Q6ZNX1 250 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 LRRC20Q8TCA0 184 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
CHPF2-202ENST00000465601 F6UB75 175 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 H3BMM0 161 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 H3BQ15 152 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 CA1P00915 261 aaPredicted RBP9.08□□□□□ -0.96
CHPF2-202ENST00000465601 Q6ZWC4 215 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 SAV1Q9H4B6 383 aaPredicted RBP9.08□□□□□ -0.96
CHPF2-202ENST00000465601 RPRMQ9NS64 109 aa9.08□□□□□ -0.96
CHPF2-202ENST00000465601 ARPC5O15511 151 aa9.07□□□□□ -0.96
CHPF2-202ENST00000465601 SPRY2O43597 315 aa9.07□□□□□ -0.96
CHPF2-202ENST00000465601 IGKV3-20P01619 116 aa9.07□□□□□ -0.96
CHPF2-202ENST00000465601 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
CHPF2-202ENST00000465601 IGLC2P0DOY2 106 aa9.07□□□□□ -0.96
CHPF2-202ENST00000465601 HLA-DRB4P13762 266 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms