RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GALR1P47211 349 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 CMC4P56277 68 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-209ENST00000465132 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
CPSF4-209ENST00000465132 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-209ENST00000465132 STXBP6Q8NFX7 210 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
CPSF4-209ENST00000465132 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-209ENST00000465132 DOK5Q9P104 306 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 GP9P14770 177 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 TAS2R45P59539 299 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 RHOBP62745 196 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 LGALSLQ3ZCW2 172 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-209ENST00000465132 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-209ENST00000465132 SHANK2-AS3Q9BTD1 123 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 MLXQ9UH92 298 aa13.13□□□□□ -0.31
CPSF4-209ENST00000465132 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 A0A1W2PPV4 95 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 H3BRN7 92 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 TSPAN4O14817 238 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 M6PRP20645 277 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 CD300EQ496F6 205 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-209ENST00000465132 SIGLEC15Q6ZMC9 328 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 SLC51BQ86UW2 128 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
CPSF4-209ENST00000465132 IGHV3-49A0A0A0MS15 119 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-209ENST00000465132 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 AKR1C8PQ5T2L2 129 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 GTSCR1Q86UQ5 136 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 STOML3Q8TAV4 291 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 ZMAT4Q9H898 229 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 SLC25A22Q9H936 323 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
CPSF4-209ENST00000465132 IGHV3OR16-13A0A075B7E8 117 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 IGHV3-74A0A0B4J1X5 117 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 UMAD1C9J7I0 102 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-209ENST00000465132 GUCA2BQ16661 112 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 C9orf62Q8N4C0 152 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 OR10G4Q8NGN3 311 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 OR10G9Q8NGN4 311 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 OR10G7Q8NGN6 311 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
CPSF4-209ENST00000465132 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 APOHP02749 345 aaPredicted RBP13.09□□□□□ -0.31
CPSF4-209ENST00000465132 SPP1P10451 314 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 CD300CQ08708 224 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 UHRF2Q96PU4 802 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 CITED4Q96RK1 184 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 SLC25A32Q9H2D1 315 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 SEPSECSQ9HD40 501 aaKnown RBP13.09□□□□□ -0.31
CPSF4-209ENST00000465132 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
CPSF4-209ENST00000465132 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 ID1P41134 155 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 GUK1Q16774 197 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 KHDC3LQ587J8 217 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 TMEM41BQ5BJD5 291 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
CPSF4-209ENST00000465132 ACTR3CQ9C0K3 210 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-209ENST00000465132 RAB5CP51148 216 aa13.07□□□□□ -0.32
CPSF4-209ENST00000465132 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
CPSF4-209ENST00000465132 DPPA3Q6W0C5 159 aa13.07□□□□□ -0.32
CPSF4-209ENST00000465132 SCRT1Q9BWW7 348 aa13.07□□□□□ -0.32
CPSF4-209ENST00000465132 CLEC5AQ9NY25 188 aa13.07□□□□□ -0.32
CPSF4-209ENST00000465132 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
CPSF4-209ENST00000465132 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 EDN2P20800 178 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 Q8N1Y9 231 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 LRRC20Q8TCA0 184 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 PHYHIPLQ96FC7 376 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 MS4A6AQ9H2W1 248 aa13.06□□□□□ -0.32
CPSF4-209ENST00000465132 LCE6AA0A183 80 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-209ENST00000465132 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 SH3BGRL3Q9H299 93 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 SACSQ9NZJ4 4579 aa13.05□□□□□ -0.32
CPSF4-209ENST00000465132 A0A087X0K7 114 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 A8MZ25 164 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms