RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 DEDDO75618 318 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 MEOX2P50222 304 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 IFITM3Q01628 133 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 RAB32Q13637 225 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
XRN1-204ENST00000465074 NRARPQ7Z6K4 114 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 LRRC20Q8TCA0 184 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 PHLDA1Q8WV24 401 aaPredicted RBP8.87□□□□□ -0.99
XRN1-204ENST00000465074 C1QTNF4Q9BXJ3 329 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 RPRMQ9NS64 109 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 SLC45A2Q9UMX9 530 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
XRN1-204ENST00000465074 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
XRN1-204ENST00000465074 INMT-MINDY4F8WBC2 141 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 H3BRN7 92 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 SOCS3O14543 225 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 COX7A2P2O60397 106 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
XRN1-204ENST00000465074 PRB4P10163 310 aaPredicted RBP8.86□□□□□ -0.99
XRN1-204ENST00000465074 FAM78BQ5VT40 261 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 FOXI2Q6ZQN5 318 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 S100A7AQ86SG5 101 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 GPR82Q96P67 336 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
XRN1-204ENST00000465074 SAV1Q9H4B6 383 aaPredicted RBP8.86□□□□□ -0.99
XRN1-204ENST00000465074 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 FNDC10F2Z333 226 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 LY6G6CO95867 125 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 ZNF705DP0CH99 300 aaPredicted RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 RBMY1A1P0DJD3 496 aaKnown RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 RBMY1CP0DJD4 496 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 RPL7P18124 248 aaKnown RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 DEFA1P59665 94 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 DEFA3P59666 94 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 BAXQ07812 192 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 RAB31Q13636 194 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 RBMY1FQ15415 496 aaKnown RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 LRRC37A5PQ49AS3 106 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 SAMD13Q5VXD3 122 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 ZNF546Q86UE3 836 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 STX12Q86Y82 276 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 Q8NAQ8 132 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 MGST2Q99735 147 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 GGACTQ9BVM4 153 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 MFFQ9GZY8 342 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 SLC35B3Q9H1N7 401 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 ARV1Q9H2C2 271 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 C11orf68Q9H3H3 251 aaKnown RBP8.85□□□□□ -0.99
XRN1-204ENST00000465074 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 UQCC1Q9NVA1 299 aa8.85□□□□□ -0.99
XRN1-204ENST00000465074 UBE2L5PA0A1B0GUS4 154 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 IGSF23A1L1A6 192 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 SSNA1O43805 119 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 MIFP14174 115 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 CAMLGP49069 296 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 EMP1P54849 157 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 PSG9Q00887 426 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 PATE2Q6UY27 113 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 ZNF738Q8NE65 137 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 X6R8D5 127 aa8.84□□□□□ -0.99
XRN1-204ENST00000465074 DYNC2H1Q8NCM8 4307 aaKnown RBP8.84□□□□□ -1
XRN1-204ENST00000465074 STARD9Q9P2P6 4700 aa8.83□□□□□ -1
XRN1-204ENST00000465074 A0A0J9YX75 114 aa8.83□□□□□ -1
XRN1-204ENST00000465074 H3BTX0 84 aa8.83□□□□□ -1
XRN1-204ENST00000465074 RLN2P04090 185 aa8.83□□□□□ -1
XRN1-204ENST00000465074 HLA-DMBP28068 263 aa8.83□□□□□ -1
XRN1-204ENST00000465074 SULT1A1P50225 295 aa8.83□□□□□ -1
XRN1-204ENST00000465074 PLP1P60201 277 aa8.83□□□□□ -1
XRN1-204ENST00000465074 HBG1P69891 147 aa8.83□□□□□ -1
XRN1-204ENST00000465074 HBG2P69892 147 aa8.83□□□□□ -1
XRN1-204ENST00000465074 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
XRN1-204ENST00000465074 MIC13Q5XKP0 118 aa8.83□□□□□ -1
XRN1-204ENST00000465074 Q6ZRG5 221 aa8.83□□□□□ -1
XRN1-204ENST00000465074 ZNF767PQ75MW2 155 aa8.83□□□□□ -1
XRN1-204ENST00000465074 C17orf77Q96MU5 243 aa8.83□□□□□ -1
XRN1-204ENST00000465074 C11orf1Q9H5F2 150 aa8.83□□□□□ -1
XRN1-204ENST00000465074 LYRM2Q9NU23 88 aaPredicted RBP8.83□□□□□ -1
XRN1-204ENST00000465074 RYR3Q15413 4870 aa8.82□□□□□ -1
XRN1-204ENST00000465074 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
XRN1-204ENST00000465074 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
XRN1-204ENST00000465074 ZNF705EA8MWA4 302 aaPredicted RBP8.82□□□□□ -1
XRN1-204ENST00000465074 PRAF2O60831 178 aa8.82□□□□□ -1
XRN1-204ENST00000465074 FGF7P21781 194 aa8.82□□□□□ -1
XRN1-204ENST00000465074 S100A11P31949 105 aa8.82□□□□□ -1
XRN1-204ENST00000465074 RHOBP62745 196 aa8.82□□□□□ -1
XRN1-204ENST00000465074 PXDC1Q5TGL8 231 aa8.82□□□□□ -1
XRN1-204ENST00000465074 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
XRN1-204ENST00000465074 TMEM252Q8N6L7 170 aa8.82□□□□□ -1
XRN1-204ENST00000465074 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
XRN1-204ENST00000465074 PPP1R14DQ9NXH3 145 aa8.82□□□□□ -1
XRN1-204ENST00000465074 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms