RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 LHFPL4Q7Z7J7 247 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 NUP37Q8NFH4 326 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 OR2K2Q8NGT1 345 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 F11RQ9Y624 299 aaKnown RBP5.79□□□□□ -1.48
USP48-206ENST00000464577 WDFY3Q8IZQ1 3526 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 FAM186AA6NE01 2351 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 TRBV19A0A075B6N1 114 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 H3BUT2 72 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 HBDP02042 147 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 CT45A10P0DMU9 189 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 IFI27P40305 119 aaPredicted RBP5.79□□□□□ -1.48
USP48-206ENST00000464577 UQCRFS1P47985 274 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 LYZP61626 148 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 NHLH1Q02575 133 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 RBPJQ06330 500 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 PAX8Q06710 450 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 DIAPH2-AS1Q14236 149 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
USP48-206ENST00000464577 HES3Q5TGS1 186 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 FDCSPQ8NFU4 85 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 OR8A1Q8NGG7 326 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 PIFOQ8TCI5 191 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 SCNM1Q9BWG6 230 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 ARRDC1-AS1Q9H2J1 176 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 NGBQ9NPG2 151 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 SIGLEC8Q9NYZ4 499 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 K7EM74 188 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 SNAI2O43623 268 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 FCN3O75636 299 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 DLX6P56179 175 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 PSG3Q16557 428 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 FAM104BQ5XKR9 115 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 SIGLEC15Q6ZMC9 328 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 ORMDL3Q8N138 153 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 PRELID3AQ96N28 172 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 SHANK2-AS3Q9BTD1 123 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 JKAMPQ9P055 326 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 TIMM8BQ9Y5J9 83 aaPredicted RBP5.78□□□□□ -1.48
USP48-206ENST00000464577 AHCTF1Q8WYP5 2266 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 SHISA9B4DS77 424 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 TEX22C9J3V5 150 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 D6R8Y8 96 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 H3BRN7 92 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 TNFRSF13BO14836 293 aaPredicted RBP5.78□□□□□ -1.48
USP48-206ENST00000464577 CRIP1P50238 77 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 CCL11P51671 97 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 CACNG7P62955 275 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 LOXL1Q08397 574 aaPredicted RBP5.78□□□□□ -1.48
USP48-206ENST00000464577 Q71RC1 249 aaPredicted RBP5.78□□□□□ -1.48
USP48-206ENST00000464577 ABHD17AQ96GS6 310 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 ZNF414Q96IQ9 312 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 RITA1Q96K30 269 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 GUCD1Q96NT3 240 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 THYN1Q9P016 225 aa5.78□□□□□ -1.48
USP48-206ENST00000464577 CHTOPQ9Y3Y2 248 aaKnown RBP5.78□□□□□ -1.48
USP48-206ENST00000464577 PPIAL4EA0A075B759 164 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 SERTM2A0A1B0GWG4 89 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 PCNX2A6NKB5 2137 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 I3L2K1 104 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 NDUFB3O43676 98 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 FAM106CPP0CH98 169 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 PPIAL4FP0DN26 164 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 CD40P25942 277 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 RIPPLY3P57055 190 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 FAM106AQ4KMX7 169 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 TMEM155Q4W5P6 130 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 ASCL5Q7RTU5 278 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 COX8CQ7Z4L0 72 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 TNFRSF14Q92956 283 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 RASL11BQ9BPW5 248 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 SRSF8Q9BRL6 282 aaKnown RBP5.77□□□□□ -1.49
USP48-206ENST00000464577 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 SIGLEC9Q9Y336 463 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 INSIG2Q9Y5U4 225 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.49
USP48-206ENST00000464577 IGHV3-21A0A0B4J1V1 117 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 LINC01546A6NGU7 62 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 C17orf100A8MU93 164 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 MRPS12O15235 138 aaKnown RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 NKX2-8O15522 239 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 KLK10O43240 276 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 ENSAO43768 121 aaKnown RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 FABP2P12104 132 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 WT1P19544 449 aaPredicted RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 LOXP28300 417 aaPredicted RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 PRO3102Q9H379 93 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 HILPDAQ9Y5L2 63 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 HEATR1Q9H583 2144 aaKnown RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 TMEM189A5PLL7 270 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 FBLL1A6NHQ2 334 aaKnown RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 TMEM178BH3BS89 294 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 CDX4O14627 284 aaPredicted RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 CIDEAO60543 219 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 CEACAM4O75871 244 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms