RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 LCN15Q6UWW0 184 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 Q6ZS92 163 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM19A1Q7Z5A9 133 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 C1orf174Q8IYL3 243 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 C1orf158Q8N1D5 194 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 OR10P1Q8NGE3 313 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 OR5D14Q8NGL3 314 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 SCGB1C1Q8TD33 95 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 COPS9Q8WXC6 57 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 TVP23CQ96ET8 276 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 S100A16Q96FQ6 103 aaKnown RBP1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 YPEL4Q96NS1 127 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 AQP10Q96PS8 301 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 SLC25A21Q9BQT8 299 aaPredicted RBP1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 TSSK6Q9BXA6 273 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 MRPL20Q9BYC9 149 aaKnown RBP1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 VSIRQ9H7M9 311 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00574Q9H8X3 128 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 CA10Q9NS85 328 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 RBM22Q9NW64 420 aaKnown RBP eCLIP1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 COQ4Q9Y3A0 265 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 NRKQ7Z2Y5 1582 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 SHANK3Q9BYB0 1731 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 SIGLEC1Q9BZZ2 1709 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 ASXL1Q8IXJ9 1541 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 SCN9AQ15858 1988 aa1.96□□□□□ -2.1
HMGXB4-205ENST00000464480 PHRF1Q9P1Y6 1649 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 TANC1Q9C0D5 1861 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ARAP2Q8WZ64 1704 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ARHGEF5Q12774 1597 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CDC42BPGQ6DT37 1551 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 TMED7-TICAM2A0A0A6YYA0 188 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 TEX50A0A1B0GTY4 177 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 LOC102725191A0A1B0GVB3 256 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 IRGMA1A4Y4 181 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 OR2T8A6NH00 312 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 C16orf90A8MZG2 172 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 C17orf112F2Z3M2 114 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ISLRO14498 428 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 GSTZ1O43708 216 aaPredicted RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 HYPMO75409 117 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 KLF7O75840 302 aaPredicted RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 SNCGO76070 127 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 PROSCO94903 275 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 UBL3O95164 117 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 HRASP01112 189 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 KRASP01116 189 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CD8AP01732 235 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 IGHV1-46P01743 117 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 HLA-DRB1P01911 266 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 REG1AP05451 166 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 LGALS1P09382 135 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 BCL2P10415 239 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ASIPP42127 132 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CA7P43166 264 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF83P51522 516 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM258P61165 79 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 PMAIP1Q13794 54 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CEACAM16Q2WEN9 425 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 FBXL19-AS1Q494R0 122 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 HES3Q5TGS1 186 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM104BQ5XKR9 115 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 AMTNQ6UX39 209 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CLEC19AQ6UXS0 136 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 Q6ZUT4 128 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 DAZ4Q86SG3 579 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 GAPTQ8N292 157 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 C10orf126Q8N4M7 172 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 SIGLECL1Q8N7X8 197 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 OR4C16Q8NGL9 310 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 OR51H1Q8NH63 302 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CMTM2Q8TAZ6 248 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 FNDC9Q8TBE3 224 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 C2orf15Q8WU43 125 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CT55Q8WUE5 264 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 GNPNAT1Q96EK6 184 aaPredicted RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 ADAT3Q96EY9 351 aaPredicted RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 PGLYRP3Q96LB9 341 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 SDF2Q99470 211 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 NPVFQ9HCQ7 196 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 DAZ1Q9NQZ3 744 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 NDUFB11Q9NX14 153 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 PKIGQ9Y2B9 76 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 INSIG2Q9Y5U4 225 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 KIF13BQ9NQT8 1826 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 MROH2AA6NES4 1674 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 LAMB1P07942 1786 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 RAPGEF6Q8TEU7 1601 aa1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 CHD3Q12873 2000 aaKnown RBP1.95□□□□□ -2.1
HMGXB4-205ENST00000464480 C1orf167Q5SNV9 1468 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 FER1L6Q2WGJ9 1857 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 GLI2P10070 1586 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 PREX1Q8TCU6 1659 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 A0A087X0T9 212 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IGKV1-6A0A0C4DH72 117 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM236DA0A1B0GTK5 79 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 ARRDC5A6NEK1 342 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 TLCD2A6NGC4 264 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms