RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
UFM1-204ENST00000464423 CSTL1Q9H114 145 aa12.94□□□□□ -0.34
UFM1-204ENST00000464423 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
UFM1-204ENST00000464423 GALR1P47211 349 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
UFM1-204ENST00000464423 RAB31Q13636 194 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 OPCMLQ14982 345 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 ATP6V1FQ16864 119 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
UFM1-204ENST00000464423 STHQ8IWL8 128 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
UFM1-204ENST00000464423 COX7A2P2O60397 106 aa12.92□□□□□ -0.34
UFM1-204ENST00000464423 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
UFM1-204ENST00000464423 Q6ZWC4 215 aa12.92□□□□□ -0.34
UFM1-204ENST00000464423 LINC00305Q7Z4B0 112 aa12.92□□□□□ -0.34
UFM1-204ENST00000464423 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
UFM1-204ENST00000464423 UBE2CO00762 179 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 SPRY2O43597 315 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 CA1P00915 261 aaPredicted RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 PET100P0DJ07 73 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 RPL12P30050 165 aaKnown RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 FGL1Q08830 312 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 Q5BKY6 102 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 GDF5OSQ5U4N7 250 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 RNF183Q96D59 192 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 SMIM3Q9BZL3 60 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 SEPSECSQ9HD40 501 aaKnown RBP12.91□□□□□ -0.34
UFM1-204ENST00000464423 HSPB11Q9Y547 144 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 PXMP4Q9Y6I8 212 aa12.91□□□□□ -0.34
UFM1-204ENST00000464423 TRAV8-2A0A0B4J237 113 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 TRAV5A0A0B4J249 113 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 LYL1P12980 280 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 C4BPBP20851 252 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 PSMB3P49720 205 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 B2MP61769 119 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 GPR82Q96P67 336 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 NPCDR1Q9BY65 106 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
UFM1-204ENST00000464423 F6UB75 175 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 H3BMM0 161 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 ISLRO14498 428 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 MRPS12O15235 138 aaKnown RBP12.89□□□□□ -0.35
UFM1-204ENST00000464423 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
UFM1-204ENST00000464423 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
UFM1-204ENST00000464423 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
UFM1-204ENST00000464423 S100A7P31151 101 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 ID1P41134 155 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 Q6ZRG5 221 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 WFDC1Q9HC57 220 aa12.89□□□□□ -0.35
UFM1-204ENST00000464423 ELOA3CA0A087WX78 387 aaPredicted RBP12.88□□□□□ -0.35
UFM1-204ENST00000464423 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
UFM1-204ENST00000464423 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
UFM1-204ENST00000464423 MEOX2P50222 304 aa12.88□□□□□ -0.35
UFM1-204ENST00000464423 ATP5SQ99766 215 aa12.88□□□□□ -0.35
UFM1-204ENST00000464423 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
UFM1-204ENST00000464423 TP53TG1Q9Y2A0 90 aa12.88□□□□□ -0.35
UFM1-204ENST00000464423 H3BTX0 84 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 MPDU1O75352 247 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 MUC7Q8TAX7 377 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 SAV1Q9H4B6 383 aaPredicted RBP12.87□□□□□ -0.35
UFM1-204ENST00000464423 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 AGRNO00468 2067 aa12.87□□□□□ -0.35
UFM1-204ENST00000464423 A0A087X0K7 114 aa12.86□□□□□ -0.35
UFM1-204ENST00000464423 HLA-DRB4P13762 266 aa12.86□□□□□ -0.35
UFM1-204ENST00000464423 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
UFM1-204ENST00000464423 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
UFM1-204ENST00000464423 HLA-DRB4X5D2U9 266 aa12.86□□□□□ -0.35
UFM1-204ENST00000464423 A0A0J9YWU9 116 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 H3BQ15 152 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 GIPP09681 153 aaPredicted RBP12.85□□□□□ -0.35
UFM1-204ENST00000464423 SPP1P10451 314 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 FXYD7P58549 80 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
UFM1-204ENST00000464423 FOXI2Q6ZQN5 318 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 PFDN5Q99471 154 aa12.85□□□□□ -0.35
UFM1-204ENST00000464423 A0A0J9YX75 114 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
UFM1-204ENST00000464423 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
UFM1-204ENST00000464423 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 ZFAND6Q6FIF0 208 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 BPIFA4PQ86YQ2 179 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 OR11H2Q8NH07 326 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
UFM1-204ENST00000464423 SLC17A3O00476 420 aa12.83□□□□□ -0.36
UFM1-204ENST00000464423 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
UFM1-204ENST00000464423 FAM78BQ5VT40 261 aa12.83□□□□□ -0.36
UFM1-204ENST00000464423 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
UFM1-204ENST00000464423 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms