RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SAV1Q9H4B6 383 aaPredicted RBP9.41□□□□□ -0.9
XRN1-203ENST00000463916 GPN1Q9HCN4 374 aaPredicted RBP9.41□□□□□ -0.9
XRN1-203ENST00000463916 LYRM2Q9NU23 88 aaPredicted RBP9.41□□□□□ -0.9
XRN1-203ENST00000463916 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 X6R8D5 127 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 GOSR2O14653 212 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 ID1P41134 155 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 RAP2BP61225 183 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
XRN1-203ENST00000463916 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
XRN1-203ENST00000463916 ZNF705EA8MWA4 302 aaPredicted RBP9.4□□□□□ -0.9
XRN1-203ENST00000463916 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
XRN1-203ENST00000463916 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
XRN1-203ENST00000463916 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
XRN1-203ENST00000463916 C16orf92Q96LL3 132 aa9.4□□□□□ -0.9
XRN1-203ENST00000463916 ARV1Q9H2C2 271 aa9.4□□□□□ -0.9
XRN1-203ENST00000463916 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.9
XRN1-203ENST00000463916 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 PVALBP20472 110 aaPredicted RBP9.4□□□□□ -0.91
XRN1-203ENST00000463916 FXYD7P58549 80 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.91
XRN1-203ENST00000463916 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 ZNF709Q8N972 641 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.91
XRN1-203ENST00000463916 IGHV4-28A0A0C4DH34 117 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 PRAF2O60831 178 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 MEOX2P50222 304 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 SULT1A1P50225 295 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 H2BFSP57053 126 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 FGL1Q08830 312 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 VWC2Q2TAL6 325 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 ZNF546Q86UE3 836 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 GPR82Q96P67 336 aa9.39□□□□□ -0.91
XRN1-203ENST00000463916 A0A0J9YX75 114 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 H0YIZ8 118 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
XRN1-203ENST00000463916 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
XRN1-203ENST00000463916 CAMLGP49069 296 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
XRN1-203ENST00000463916 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 WDR83OSQ9Y284 106 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
XRN1-203ENST00000463916 DEFA1P59665 94 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 DEFA3P59666 94 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
XRN1-203ENST00000463916 NHLH2Q02577 135 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 MIC13Q5XKP0 118 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 LINC00305Q7Z4B0 112 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 C11orf45Q8TAV5 145 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 NMES1Q9C002 83 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 RPRMQ9NS64 109 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 UQCC1Q9NVA1 299 aa9.38□□□□□ -0.91
XRN1-203ENST00000463916 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
XRN1-203ENST00000463916 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
XRN1-203ENST00000463916 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
XRN1-203ENST00000463916 RPL7P18124 248 aaKnown RBP9.37□□□□□ -0.91
XRN1-203ENST00000463916 HLA-DMBP28068 263 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 S100A7P31151 101 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 S100A11P31949 105 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PRR20EP86478 221 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PRR20CP86479 221 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PRR20DP86480 221 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PRR20BP86481 221 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PRR20AP86496 221 aa9.37□□□□□ -0.91
XRN1-203ENST00000463916 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
XRN1-203ENST00000463916 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 MIFP14174 115 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 EBLN2Q6P2I7 272 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 STX12Q86Y82 276 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 C1QTNF4Q9BXJ3 329 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 NUPR2A6NF83 97 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 COX7A2P2O60397 106 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
XRN1-203ENST00000463916 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
XRN1-203ENST00000463916 ALMS1Q8TCU4 4167 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 A0A087X0K7 114 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 TRAV5A0A0B4J249 113 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 CXCL3P19876 107 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 HBG1P69891 147 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 HBG2P69892 147 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 PSG9Q00887 426 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 RAB31Q13636 194 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 OPCMLQ14982 345 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 RNF126Q9BV68 326 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 DNAJC4Q9NNZ3 241 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 A8MTW9 85 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 H3BTX0 84 aa9.35□□□□□ -0.91
XRN1-203ENST00000463916 SSNA1O43805 119 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms