RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RTBDNQ9BSG5 229 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-204ENST00000463684 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-204ENST00000463684 RBKSQ9H477 322 aa10.01□□□□□ -0.81
SMC1A-204ENST00000463684 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
SMC1A-204ENST00000463684 LINC00315P59091 139 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 TAS2R19P59542 299 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 FGL1Q08830 312 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 IGFL4Q6B9Z1 124 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 CDPF1Q6NVV7 123 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 ZNF738Q8NE65 137 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 OR4D5Q8NGN0 318 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 SLC45A2Q9UMX9 530 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 TMEM56-RWDD3S4R434 201 aa10□□□□□ -0.81
SMC1A-204ENST00000463684 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 ZNF701M0R085 212 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-204ENST00000463684 IFNA5P01569 189 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 CCR6P51684 374 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 ERVFC1-1P60608 527 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 RAB11AP62491 216 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 GPR107Q5VW38 600 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 STEAP1BQ6NZ63 245 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 RNF182Q8N6D2 247 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 YIPF6Q96EC8 236 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 C17orf77Q96MU5 243 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 KCNIP3Q9Y2W7 256 aa9.99□□□□□ -0.81
SMC1A-204ENST00000463684 H3BNG1 76 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 ORM2P19652 201 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-204ENST00000463684 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-204ENST00000463684 MZT2AQ6P582 158 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
SMC1A-204ENST00000463684 C15orf40Q8WUR7 153 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 C18orf15Q96N68 181 aa9.98□□□□□ -0.81
SMC1A-204ENST00000463684 FAT1Q14517 4588 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 TRAV8-2A0A0B4J237 113 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 DISC1C4P0D8 188 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMC1A-204ENST00000463684 CCDC28AQ8IWP9 274 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 THAP8Q8NA92 274 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 BPIFCQ8NFQ6 507 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
SMC1A-204ENST00000463684 TMEM147Q9BVK8 224 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
SMC1A-204ENST00000463684 GPR132Q9UNW8 380 aa9.97□□□□□ -0.81
SMC1A-204ENST00000463684 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 GAGE12BA1L429 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 FAM229AH3BQW9 127 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 H7BYZ3 331 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 GAGE7O76087 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 RLN2P04090 185 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 GAGE12FP0CL80 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 GAGE12GP0CL81 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 GAGE12IP0CL82 117 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 AKR1C4P17516 323 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 HOXA5P20719 270 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 Q6ZRN7 208 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-204ENST00000463684 OR8A1Q8NGG7 326 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 OR1S1Q8NH92 325 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 VCX3AQ9NNX9 186 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 EXTL2Q9UBQ6 330 aa9.96□□□□□ -0.82
SMC1A-204ENST00000463684 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 J3QL48 77 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 SIVA1O15304 175 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-204ENST00000463684 CDKN1BP46527 198 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 FAAP20Q6NZ36 180 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 LRRC20Q8TCA0 184 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 PRR13Q9NZ81 148 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
SMC1A-204ENST00000463684 GATA2P23769 480 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-204ENST00000463684 VBP1P61758 197 aa9.94□□□□□ -0.82
SMC1A-204ENST00000463684 NCS1P62166 190 aa9.94□□□□□ -0.82
SMC1A-204ENST00000463684 ICAM4Q14773 271 aa9.94□□□□□ -0.82
SMC1A-204ENST00000463684 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
SMC1A-204ENST00000463684 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
SMC1A-204ENST00000463684 SNURFLB1AK76 121 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 RPL7P18124 248 aaKnown RBP9.93□□□□□ -0.82
SMC1A-204ENST00000463684 KRTAP10-1P60331 282 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 RPP30P78346 268 aaKnown RBP9.93□□□□□ -0.82
SMC1A-204ENST00000463684 SSBP1Q04837 148 aaKnown RBP9.93□□□□□ -0.82
SMC1A-204ENST00000463684 PSG3Q16557 428 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 AP3S1Q92572 193 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 C20orf144Q9BQM9 153 aa9.93□□□□□ -0.82
SMC1A-204ENST00000463684 IAPPP10997 89 aa9.92□□□□□ -0.82
SMC1A-204ENST00000463684 CXCL3P19876 107 aa9.92□□□□□ -0.82
SMC1A-204ENST00000463684 RAP2BP61225 183 aa9.92□□□□□ -0.82
SMC1A-204ENST00000463684 PRRT1Q99946 306 aa9.92□□□□□ -0.82
SMC1A-204ENST00000463684 A0A096LPF7 62 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 H3BRN7 92 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 ANXA3P12429 323 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 SRPXP78539 464 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
SMC1A-204ENST00000463684 TMEM182Q6ZP80 229 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms