RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	ATP6V1F	Q16864	119 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	MIC13	Q5XKP0	118 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	OR5C1	Q8NGR4	320 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	C16orf92	Q96LL3	132 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	SHANK2-AS3	Q9BTD1	123 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	SMIM3	Q9BZL3	60 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	MBD2	Q9UBB5	411 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	SLC45A2	Q9UMX9	530 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	WDR83OS	Q9Y284	106 aa		7.1	□□□□□ -1.27
PSMD4-208	ENST00000462970	UBE2C	O00762	179 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	CA1	P00915	261 aa	Predicted RBP	7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	IGKV3-20	P01619	116 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	DEFB1	P60022	68 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	C10orf113	Q5VZT2	155 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970		Q6ZRG5	221 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	ZNF709	Q8N972	641 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	LRRC20	Q8TCA0	184 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	GPR82	Q96P67	336 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	RNF126	Q9BV68	326 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	CSTL1	Q9H114	145 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	ARV1	Q9H2C2	271 aa		7.09	□□□□□ -1.27
PSMD4-208	ENST00000462970	KIR2DL5B	A0A0G2JN68	375 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	KIR2DL5B	A0A0G2JPC4	375 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	SPRY2	O43597	315 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	SNRPC	P09234	159 aa	Known RBP	7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	RPL7	P18124	248 aa	Known RBP	7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	RPL12	P30050	165 aa	Known RBP	7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	PSMB3	P49720	205 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	MEOX2	P50222	304 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	PLP1	P60201	277 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	B2M	P61769	119 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	VWC2	Q2TAL6	325 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	PXDC1	Q5TGL8	231 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	IGFL4	Q6B9Z1	124 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	PATE2	Q6UY27	113 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	LINC00305	Q7Z4B0	112 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	KIR2DL5A	Q8N109	375 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	OR11H7	Q8NGC8	314 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	KIR2DL5B	Q8NHK3	375 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	OVOL2	Q9BRP0	275 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	SLC39A9	Q9NUM3	307 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	HSPB11	Q9Y547	144 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	PXMP4	Q9Y6I8	212 aa		7.08	□□□□□ -1.28
PSMD4-208	ENST00000462970	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970		H3BTX0	84 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	ISLR	O14498	428 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	IFNA5	P01569	189 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	OPCML	Q14982	345 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	ZFAND6	Q6FIF0	208 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970		Q6ZWC4	215 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	TRPT1	Q86TN4	253 aa	Known RBP	7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	RNF182	Q8N6D2	247 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	OR4B1	Q8NGF8	309 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	OR1L4	Q8NGR5	311 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	SCGB1C1	Q8TD33	95 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	ATP5S	Q99766	215 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	DNAJC4	Q9NNZ3	241 aa		7.07	□□□□□ -1.28
PSMD4-208	ENST00000462970	TRAV5	A0A0B4J249	113 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970		F6UB75	175 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	MPDU1	O75352	247 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	PRB4	P10163	310 aa	Predicted RBP	7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	LYL1	P12980	280 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	RPL29	P47914	159 aa	Known RBP	7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	FXYD7	P58549	80 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	SAMD13	Q5VXD3	122 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	EBLN2	Q6P2I7	272 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	ZNF738	Q8NE65	137 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	MUC7	Q8TAX7	377 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	TMEM37	Q8WXS4	190 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	RNF183	Q96D59	192 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	PFDN5	Q99471	154 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	NPCDR1	Q9BY65	106 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	RPRM	Q9NS64	109 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	CLEC5A	Q9NY25	188 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	RNF24	Q9Y225	148 aa		7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	HUWE1	Q7Z6Z7	4374 aa	Known RBP	7.06	□□□□□ -1.28
PSMD4-208	ENST00000462970	FXYD6-FXYD2	A0A087WZ82	144 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	C17orf112	F2Z3M2	114 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	SOCS3	O14543	225 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	GIP	P09681	153 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	SPP1	P10451	314 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	SMCP	P49901	116 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	OXA1L	Q15070	435 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	GCSAML	Q5JQS6	135 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	GDF5OS	Q5U4N7	250 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	MORN5	Q5VZ52	161 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	MORN3	Q6PF18	240 aa	Predicted RBP	7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	BPIFA4P	Q86YQ2	179 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	OR11H2	Q8NH07	326 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	C20orf173	Q96LM9	149 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	SEPSECS	Q9HD40	501 aa	Known RBP	7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	KCNIP2	Q9NS61	270 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970	XCL2	Q9UBD3	114 aa		7.05	□□□□□ -1.28
PSMD4-208	ENST00000462970		A0A0J9YWU9	116 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970		H3BMM0	161 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	ZNF705D	P0CH99	300 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	ZNF705B	P0CI00	300 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	HLA-DRB4	P13762	266 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	C4BPB	P20851	252 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms