RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FFAR4Q5NUL3 377 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 FAM78BQ5VT40 261 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 FAM90A2PQ658T7 463 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 TMEM182Q6ZP80 229 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-206ENST00000462613 TCTE3Q8IZS6 198 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 HSD17B11Q8NBQ5 300 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 ZNF414Q96IQ9 312 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 HYLS1Q96M11 299 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 ARPC5LQ9BPX5 153 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 PSMG3Q9BT73 122 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-206ENST00000462613 SLC25A32Q9H2D1 315 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 SEPSECSQ9HD40 501 aaKnown RBP4.79□□□□□ -1.64
SF3B1-206ENST00000462613 TIMM9Q9Y5J7 89 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 ANK2Q01484 3957 aa4.79□□□□□ -1.64
SF3B1-206ENST00000462613 AGRNO00468 2067 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 RNF222A6NCQ9 220 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 A8MZ25 164 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 SMLR1H3BR10 107 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 K7EIL1 84 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 K7EQG2 157 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 ISLRO14498 428 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 C1QBP02746 253 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 IGHV4-30-4P0DP06 118 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 CXCL2P19875 107 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 M6PRP20645 277 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 PSMB3P49720 205 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 APOC4P55056 127 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 GUK1Q16774 197 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 KHDC3LQ587J8 217 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 Q5BKY6 102 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 EIF5AL1Q6IS14 154 aaKnown RBP4.78□□□□□ -1.64
SF3B1-206ENST00000462613 LCN15Q6UWW0 184 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 STHQ8IWL8 128 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 SLC50A1Q9BRV3 221 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 RSG1Q9BU20 258 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 SRD5A3Q9H8P0 318 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 RPRMQ9NS64 109 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 CLEC5AQ9NY25 188 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 UBQLN2Q9UHD9 624 aa4.78□□□□□ -1.64
SF3B1-206ENST00000462613 A0A087X0K7 114 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 LOC102724200A0A096LPH7 203 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-206ENST00000462613 OR7C2O60412 319 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF688P0C7X2 276 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 DEFB131AP59861 70 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 NUTF2P61970 127 aaKnown RBP4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ZFP69Q49AA0 526 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 PSMG4Q5JS54 123 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 AKR1C8PQ5T2L2 129 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 EBLN2Q6P2I7 272 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 PATE2Q6UY27 113 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 KCNRGQ8N5I3 272 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 DEFB125Q8N687 156 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 OR2G3Q8NGZ4 309 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 DCANP1Q8TF63 244 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 TMEM37Q8WXS4 190 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ST6GAL2Q96JF0 529 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 LINC00052Q96N35 136 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF471Q9BX82 626 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-206ENST00000462613 AAMDCQ9H7C9 122 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
SF3B1-206ENST00000462613 TRRAPQ9Y4A5 3859 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 G3V3Q6 166 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 BCL2L11O43521 198 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF253O75346 499 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 FRMD6-AS1P0C7T7 363 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 HIST1H1EP10412 219 aaKnown RBP4.76□□□□□ -1.65
SF3B1-206ENST00000462613 CDC34P49427 236 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-206ENST00000462613 PSG9Q00887 426 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 PDE6HQ13956 83 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 ODF3L2Q3SX64 289 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 TMEM41BQ5BJD5 291 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 FAM74A1Q5RGS3 127 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 SPATA31B1PQ5VZV4 182 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 RPL7L1Q6DKI1 246 aaKnown RBP4.76□□□□□ -1.65
SF3B1-206ENST00000462613 FAM122CQ6P4D5 195 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 PQLC2Q6ZP29 291 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 Q8N1Y9 231 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 OR10G4Q8NGN3 311 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 OR10G9Q8NGN4 311 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 OR10G7Q8NGN6 311 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 B9D2Q9BPU9 175 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 ACTR3CQ9C0K3 210 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-206ENST00000462613 HRH4Q9H3N8 390 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 WFDC1Q9HC57 220 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 TMEM14CQ9P0S9 112 aa4.76□□□□□ -1.65
SF3B1-206ENST00000462613 UMAD1C9J7I0 102 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 UBE2CO00762 179 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 DUSP14O95147 198 aaKnown RBP4.75□□□□□ -1.65
SF3B1-206ENST00000462613 NHLRC4P0CG21 123 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-206ENST00000462613 SPP1P10451 314 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 UBE2L3P68036 154 aaKnown RBP4.75□□□□□ -1.65
SF3B1-206ENST00000462613 MORN3Q6PF18 240 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms