RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 L7N2F9 121 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 NKX2-5P52952 324 aaPredicted RBP6.47□□□□□ -1.37
LDB1-203ENST00000461873 VAMP2P63027 116 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 EWSR1Q01844 656 aaKnown RBP eCLIP6.47□□□□□ -1.37
LDB1-203ENST00000461873 LRRC37A5PQ49AS3 106 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 LGALS9CQ6DKI2 356 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 GOLT1BQ9Y3E0 138 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 PLECQ15149 4684 aaKnown RBP6.46□□□□□ -1.37
LDB1-203ENST00000461873 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 H3BMM0 161 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 ISLRO14498 428 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 SSSCA1O60232 199 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 PITX3O75364 302 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 HLA-DRB4P13762 266 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 EMP1P54849 157 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 IAH1Q2TAA2 248 aaPredicted RBP6.46□□□□□ -1.38
LDB1-203ENST00000461873 OR10P1Q8NGE3 313 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 C2orf50Q96LR7 162 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 RSG1Q9BU20 258 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 HLA-DRB4X5D2U9 266 aa6.46□□□□□ -1.38
LDB1-203ENST00000461873 ZNF705EA8MWA4 302 aaPredicted RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 HYPMO75409 117 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 DUSP14O95147 198 aaKnown RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 HBE1P02100 147 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 OR5G3P0C626 314 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 PVALBP20472 110 aaPredicted RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 C4BPBP20851 252 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 FXYD7P58549 80 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 SELENOTP62341 195 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 POLR2GP62487 172 aaKnown RBP eCLIP6.45□□□□□ -1.38
LDB1-203ENST00000461873 PSG9Q00887 426 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 RAB31Q13636 194 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 ACOT7LQ6ZUV0 252 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 ZBTB8BQ8NAP8 495 aaPredicted RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 Q8NAQ8 132 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 OR11H4Q8NGC9 324 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 OR4D5Q8NGN0 318 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 OR2T35Q8NGX2 323 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 SAV1Q9H4B6 383 aaPredicted RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 NPVFQ9HCQ7 196 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 HIGD1AQ9Y241 93 aa6.45□□□□□ -1.38
LDB1-203ENST00000461873 LSM5Q9Y4Y9 91 aaKnown RBP6.45□□□□□ -1.38
LDB1-203ENST00000461873 IGKV1D-37A0A075B6S9 117 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 ZNF98A6NK75 572 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 G3V3Q6 166 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 GIPP09681 153 aaPredicted RBP6.44□□□□□ -1.38
LDB1-203ENST00000461873 RPL7P18124 248 aaKnown RBP6.44□□□□□ -1.38
LDB1-203ENST00000461873 S100A10P60903 97 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 RAB32Q13637 225 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 TMEM144Q7Z5S9 345 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 SMIM8Q96KF7 97 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 NDUFAF3Q9BU61 184 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 RNF126Q9BV68 326 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 DOK5Q9P104 306 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 RFNGQ9Y644 331 aa6.44□□□□□ -1.38
LDB1-203ENST00000461873 H0YIZ8 118 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 MBPP02686 304 aaPredicted RBP6.43□□□□□ -1.38
LDB1-203ENST00000461873 AMBPP02760 352 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 LINC00869P0C866 280 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 RBMY1A1P0DJD3 496 aaKnown RBP6.43□□□□□ -1.38
LDB1-203ENST00000461873 RBMY1CP0DJD4 496 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 RHOBP62745 196 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 ID3Q02535 119 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 IL15RAQ13261 267 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
LDB1-203ENST00000461873 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 FAM78BQ5VT40 261 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 Q6ZRG5 221 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 Q6ZTC4 211 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 UBE2DNLQ8IWF7 75 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 TCTE3Q8IZS6 198 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 ZNF738Q8NE65 137 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 PPP1R1CQ8WVI7 109 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 OR5AC2Q9NZP5 309 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
LDB1-203ENST00000461873 X6R8D5 127 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 DNAH1Q9P2D7 4330 aa6.43□□□□□ -1.38
LDB1-203ENST00000461873 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 IGHV4-4A0A075B6R2 117 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 FXYD6-FXYD2A0A087WZ82 144 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 K7EPK0 472 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 TSC22D2O75157 780 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 MPC2O95563 127 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 INSP01308 110 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 METTL15P1P0C7V9 234 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 P0DMU3 169 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
LDB1-203ENST00000461873 GATA2P23769 480 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms