RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 OR2F1Q13607 317 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 TMEM252Q8N6L7 170 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 TMEM217Q8N7C4 229 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 RARRES2Q99969 163 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 ARPC5LQ9BPX5 153 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 MBD2Q9UBB5 411 aa12.77□□□□□ -0.37
MRPL28-207ENST00000461550 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 LYZP61626 148 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 AKR1C1Q04828 323 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 OPCMLQ14982 345 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
MRPL28-207ENST00000461550 IGKV1OR2-108A0A075B7D4 117 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 JTBO76095 146 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 DLK1P80370 383 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 SLC38A11Q08AI6 406 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 TRPT1Q86TN4 253 aaKnown RBP12.75□□□□□ -0.37
MRPL28-207ENST00000461550 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
MRPL28-207ENST00000461550 HMSDA8MTL9 139 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 DEFB4AO15263 64 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
MRPL28-207ENST00000461550 SULT1A1P50225 295 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 NHLH2Q02577 135 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
MRPL28-207ENST00000461550 THAP8Q8NA92 274 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
MRPL28-207ENST00000461550 FXYD6-FXYD2A0A087WZ82 144 aa12.73□□□□□ -0.37
MRPL28-207ENST00000461550 TMEM144Q7Z5S9 345 aa12.73□□□□□ -0.37
MRPL28-207ENST00000461550 STX12Q86Y82 276 aa12.73□□□□□ -0.37
MRPL28-207ENST00000461550 TRGV9Q99603 122 aa12.73□□□□□ -0.37
MRPL28-207ENST00000461550 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
MRPL28-207ENST00000461550 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
MRPL28-207ENST00000461550 DNAH1Q9P2D7 4330 aa12.72□□□□□ -0.37
MRPL28-207ENST00000461550 FABP1P07148 127 aa12.72□□□□□ -0.37
MRPL28-207ENST00000461550 GATA2P23769 480 aaPredicted RBP12.72□□□□□ -0.37
MRPL28-207ENST00000461550 ZNF546Q86UE3 836 aa12.72□□□□□ -0.37
MRPL28-207ENST00000461550 CLEC5AQ9NY25 188 aa12.72□□□□□ -0.37
MRPL28-207ENST00000461550 PLECQ15149 4684 aaKnown RBP12.71□□□□□ -0.37
MRPL28-207ENST00000461550 NUPR2A6NF83 97 aa12.71□□□□□ -0.38
MRPL28-207ENST00000461550 S100A11P31949 105 aa12.71□□□□□ -0.38
MRPL28-207ENST00000461550 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.38
MRPL28-207ENST00000461550 DEFB1P60022 68 aa12.71□□□□□ -0.38
MRPL28-207ENST00000461550 SNRPD3P62318 126 aaKnown RBP12.71□□□□□ -0.38
MRPL28-207ENST00000461550 TMEM182Q6ZP80 229 aaPredicted RBP12.71□□□□□ -0.38
MRPL28-207ENST00000461550 GGACTQ9BVM4 153 aa12.71□□□□□ -0.38
MRPL28-207ENST00000461550 PFDN2Q9UHV9 154 aa12.71□□□□□ -0.38
MRPL28-207ENST00000461550 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 CFDP00746 253 aaPredicted RBP12.7□□□□□ -0.38
MRPL28-207ENST00000461550 SPP1P10451 314 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 ATF4P18848 351 aaPredicted RBP12.7□□□□□ -0.38
MRPL28-207ENST00000461550 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
MRPL28-207ENST00000461550 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
MRPL28-207ENST00000461550 HBG1P69891 147 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 HBG2P69892 147 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
MRPL28-207ENST00000461550 OR5C1Q8NGR4 320 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 UQCC1Q9NVA1 299 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 ALMS1Q8TCU4 4167 aa12.7□□□□□ -0.38
MRPL28-207ENST00000461550 ARPC5O15511 151 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 CLINT1Q14677 625 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 MORN3Q6PF18 240 aaPredicted RBP12.69□□□□□ -0.38
MRPL28-207ENST00000461550 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 TMEM147Q9BVK8 224 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
MRPL28-207ENST00000461550 HYDINQ4G0P3 5121 aa12.69□□□□□ -0.38
MRPL28-207ENST00000461550 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 RNF222A6NCQ9 220 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 INO80EQ8NBZ0 244 aaPredicted RBP12.68□□□□□ -0.38
MRPL28-207ENST00000461550 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
MRPL28-207ENST00000461550 LINC00052Q96N35 136 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 FBXL17Q9UF56 701 aa12.68□□□□□ -0.38
MRPL28-207ENST00000461550 ORM2P19652 201 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 CXCL2P19875 107 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 BAXQ07812 192 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 OR8I2Q8N0Y5 310 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 Q8NAQ8 132 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 AQP10Q96PS8 301 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 MGST2Q99735 147 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 SLC25A22Q9H936 323 aa12.67□□□□□ -0.38
MRPL28-207ENST00000461550 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 H3BMM0 161 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 AGPAT2O15120 278 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 SCO1O75880 301 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 NMBP08949 121 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 BPIFCQ8NFQ6 507 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 LINC00476Q8WZB0 136 aa12.66□□□□□ -0.38
MRPL28-207ENST00000461550 MFFQ9GZY8 342 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms