RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 ZADH2Q8N4Q0 377 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 C9orf106Q8NAJ2 232 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 NHP2Q9NX24 153 aaKnown RBP10.06□□□□□ -0.8
AGRN-203ENST00000461111 CEP295Q9C0D2 2601 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 INO80CQ6PI98 192 aaPredicted RBP10.06□□□□□ -0.8
AGRN-203ENST00000461111 AMTNQ6UX39 209 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 OR10X1Q8NGY0 326 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 SPG11Q96JI7 2443 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 NDUFS8O00217 210 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
AGRN-203ENST00000461111 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
AGRN-203ENST00000461111 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
AGRN-203ENST00000461111 CCL3L1P16619 93 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 CD69Q07108 199 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 CCL17Q92583 94 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 PRNDQ9UKY0 176 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 FNDC10F2Z333 226 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 LCNL1Q6ZST4 164 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 GCSAMQ8N6F7 178 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 PSMB11A5LHX3 300 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 K7EQM0 130 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 C1orf210Q8IVY1 113 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 ARPC1AQ92747 370 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 FXYD5Q96DB9 178 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 PROCRQ9UNN8 238 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 S4R3C0 116 aa10.05□□□□□ -0.8
AGRN-203ENST00000461111 TLN1Q9Y490 2541 aaKnown RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 RNASE2P10153 161 aaKnown RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 FXYD2P54710 66 aa10.04□□□□□ -0.8
AGRN-203ENST00000461111 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
AGRN-203ENST00000461111 INSIG2Q9Y5U4 225 aa10.04□□□□□ -0.8
AGRN-203ENST00000461111 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 TNFAIP6P98066 277 aaPredicted RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 Q6ZT83 130 aa10.04□□□□□ -0.8
AGRN-203ENST00000461111 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
AGRN-203ENST00000461111 E7EUB6 86 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 SMKR1H3BMG3 65 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 H3BMG7 143 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 SLC25A17O43808 307 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 FGF6P10767 208 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 EXOC3-AS1Q8N2X6 119 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 FDCSPQ8NFU4 85 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 C19orf24Q9BVV8 132 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
AGRN-203ENST00000461111 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 CRYBA4P53673 196 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 PLGLAQ15195 96 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
AGRN-203ENST00000461111 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.87e-8■■□□□ 12.9
AGRN-203ENST00000461111 A0A1B0GUT8 65 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 A0A1W2PNU3 283 aaPredicted RBP10.03□□□□□ -0.8
AGRN-203ENST00000461111 UPK2O00526 184 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 LOXL3P58215 753 aa10.03□□□□□ -0.8
AGRN-203ENST00000461111 LTAP01374 205 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 KIR2DS2P43631 304 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 CCDC144NLQ6NUI1 221 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 MRPL20Q9BYC9 149 aaKnown RBP10.02□□□□□ -0.81
AGRN-203ENST00000461111 D6R8Y8 96 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 J3QR89 54 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 FTH1P19P0C7X4 201 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 INSL3P51460 131 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 LYZP61626 148 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
AGRN-203ENST00000461111 Q9H3A6 140 aa10.02□□□□□ -0.81
AGRN-203ENST00000461111 IGHV1-18A0A0C4DH31 117 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 KIR2DL2P43627 348 aaPredicted RBP10.01□□□□□ -0.81
AGRN-203ENST00000461111 STXBP6Q8NFX7 210 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 TECTAO75443 2155 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 DLL1O00548 723 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 DIAPH2-AS1Q14236 149 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 MSMPQ1L6U9 139 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 RBP4P02753 201 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 FAM90A1Q86YD7 464 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 RPRMLQ8N4K4 120 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 DDB2Q92466 427 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 ATRXP46100 2492 aa10.01□□□□□ -0.81
AGRN-203ENST00000461111 PRSS1P07477 247 aa10□□□□□ -0.81
AGRN-203ENST00000461111 RIGQ13278 110 aa10□□□□□ -0.81
AGRN-203ENST00000461111 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
AGRN-203ENST00000461111 SVEP1Q4LDE5 3571 aa10□□□□□ -0.81
AGRN-203ENST00000461111 TCRAP04437 139 aa10□□□□□ -0.81
AGRN-203ENST00000461111 APOBEC3AP31941 199 aaPredicted RBP10□□□□□ -0.81
AGRN-203ENST00000461111 C2orf83Q53S99 150 aa10□□□□□ -0.81
AGRN-203ENST00000461111 AMN1Q8IY45 258 aa10□□□□□ -0.81
AGRN-203ENST00000461111 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
AGRN-203ENST00000461111 VGLL1Q99990 258 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms