RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 APOHP02749 345 aaPredicted RBP7.98□□□□□ -1.13
UBR4-208ENST00000459947 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 ODF3L2Q3SX64 289 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 LINC00322Q6ZN03 302 aaPredicted RBP7.98□□□□□ -1.13
UBR4-208ENST00000459947 CLUHP3Q96NS8 147 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 SPP1P10451 314 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 CXCL3P19876 107 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 SLC25A32Q9H2D1 315 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 IGHV3-66A0A0C4DH42 116 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 TFPI2P48307 235 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 NHLH2Q02577 135 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 CLINT1Q14677 625 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 DEFB125Q8N687 156 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 OR2T35Q8NGX2 323 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 DCANP1Q8TF63 244 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 U3KQK5 164 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 ZNF253O75346 499 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 MBP02144 154 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 TAS2R45P59539 299 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 EIF5AP63241 154 aaKnown RBP7.97□□□□□ -1.13
UBR4-208ENST00000459947 STHQ8IWL8 128 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 GBGT1Q8N5D6 347 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 TM2D3Q9BRN9 247 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 C1QTNF4Q9BXJ3 329 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 RPRMQ9NS64 109 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 TMEM14CQ9P0S9 112 aa7.97□□□□□ -1.13
UBR4-208ENST00000459947 DUSP14O95147 198 aaKnown RBP7.96□□□□□ -1.13
UBR4-208ENST00000459947 AMBPP02760 352 aa7.96□□□□□ -1.13
UBR4-208ENST00000459947 DEFB131AP59861 70 aa7.96□□□□□ -1.13
UBR4-208ENST00000459947 NUTF2P61970 127 aaKnown RBP7.96□□□□□ -1.13
UBR4-208ENST00000459947 ACOT6Q3I5F7 207 aaPredicted RBP7.96□□□□□ -1.13
UBR4-208ENST00000459947 MIC13Q5XKP0 118 aa7.96□□□□□ -1.13
UBR4-208ENST00000459947 GNPNAT1Q96EK6 184 aaPredicted RBP7.96□□□□□ -1.13
UBR4-208ENST00000459947 PSMG3Q9BT73 122 aaPredicted RBP7.96□□□□□ -1.13
UBR4-208ENST00000459947 FOXI2Q6ZQN5 318 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 Q6ZWC4 215 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 LINC00305Q7Z4B0 112 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 C16orf92Q96LL3 132 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 DOK5Q9P104 306 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 EBLN2Q6P2I7 272 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 SLC25A22Q9H936 323 aa7.96□□□□□ -1.14
UBR4-208ENST00000459947 A0A1B0GVG6 124 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 HAGHQ16775 308 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 IL17DQ8TAD2 202 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 IGKV3-7A0A075B6H7 116 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 FXYD6-FXYD2A0A087WZ82 144 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 GATA2P23769 480 aaPredicted RBP7.95□□□□□ -1.14
UBR4-208ENST00000459947 RHOBP62745 196 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 TNFSF18Q9UNG2 199 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 C4BPBP20851 252 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 PDE6HQ13956 83 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 MRPL53Q96EL3 112 aaKnown RBP7.95□□□□□ -1.14
UBR4-208ENST00000459947 RSG1Q9BU20 258 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 SCRT1Q9BWW7 348 aa7.95□□□□□ -1.14
UBR4-208ENST00000459947 HMSDA8MTL9 139 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 ZNF345Q14585 488 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 A0A0D9SG52 128 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 ZNF688P0C7X2 276 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 SERF2P84101 59 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 PSG9Q00887 426 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 PSMG4Q5JS54 123 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 TMEM182Q6ZP80 229 aaPredicted RBP7.94□□□□□ -1.14
UBR4-208ENST00000459947 OR2G3Q8NGZ4 309 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 Q6ZNX1 250 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 CSTL1Q9H114 145 aa7.94□□□□□ -1.14
UBR4-208ENST00000459947 RBMY1BA6NDE4 496 aaKnown RBP7.93□□□□□ -1.14
UBR4-208ENST00000459947 RBMY1EA6NEQ0 496 aaKnown RBP7.93□□□□□ -1.14
UBR4-208ENST00000459947 JTBO76095 146 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 RBMY1DP0C7P1 496 aaKnown RBP7.93□□□□□ -1.14
UBR4-208ENST00000459947 KHDC3LQ587J8 217 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 PATE2Q6UY27 113 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 PCP4L1A6NKN8 68 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 SOCS3O14543 225 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 HIST1H1EP10412 219 aaKnown RBP7.93□□□□□ -1.14
UBR4-208ENST00000459947 HLA-DRB4P13762 266 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 FFAR4Q5NUL3 377 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 TRPT1Q86TN4 253 aaKnown RBP7.93□□□□□ -1.14
UBR4-208ENST00000459947 SBSPONQ8IVN8 264 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 FUT9Q9Y231 359 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 HLA-DRB4X5D2U9 266 aa7.93□□□□□ -1.14
UBR4-208ENST00000459947 RCHY1Q96PM5 261 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 SMIM3Q9BZL3 60 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 HRH4Q9H3N8 390 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 SAV1Q9H4B6 383 aaPredicted RBP7.92□□□□□ -1.14
UBR4-208ENST00000459947 M6PRP20645 277 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 FAM78BQ5VT40 261 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 ASCL2Q99929 193 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 MFFQ9GZY8 342 aa7.92□□□□□ -1.14
UBR4-208ENST00000459947 A0A1W2PPV4 95 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 PSG3Q16557 428 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 LINC00052Q96N35 136 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 SPRY2O43597 315 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms