RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SCRT1Q9BWW7 348 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 SACSQ9NZJ4 4579 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 ELOA3CA0A087WX78 387 aaPredicted RBP16.08■□□□□ 0.16
SSNA1-202ENST00000459860 UBE2CO00762 179 aa16.08■□□□□ 0.16
SSNA1-202ENST00000459860 CLINT1Q14677 625 aa16.08■□□□□ 0.16
SSNA1-202ENST00000459860 OR11H7Q8NGC8 314 aa16.08■□□□□ 0.16
SSNA1-202ENST00000459860 UHRF2Q96PU4 802 aa16.08■□□□□ 0.16
SSNA1-202ENST00000459860 RNF126Q9BV68 326 aa16.08■□□□□ 0.16
SSNA1-202ENST00000459860 C3orf84H3BNL1 204 aa16.07■□□□□ 0.16
SSNA1-202ENST00000459860 RPL7P18124 248 aaKnown RBP16.07■□□□□ 0.16
SSNA1-202ENST00000459860 ATF4P18848 351 aaPredicted RBP16.07■□□□□ 0.16
SSNA1-202ENST00000459860 RPL12P30050 165 aaKnown RBP16.07■□□□□ 0.16
SSNA1-202ENST00000459860 FGL1Q08830 312 aa16.07■□□□□ 0.16
SSNA1-202ENST00000459860 OR1L4Q8NGR5 311 aa16.07■□□□□ 0.16
SSNA1-202ENST00000459860 RETNQ9HD89 108 aa16.07■□□□□ 0.16
SSNA1-202ENST00000459860 HSPB11Q9Y547 144 aa16.07■□□□□ 0.16
SSNA1-202ENST00000459860 RPL29P47914 159 aaKnown RBP16.06■□□□□ 0.16
SSNA1-202ENST00000459860 PSMB3P49720 205 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 B2MP61769 119 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 OPCMLQ14982 345 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 C10orf113Q5VZT2 155 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 MIC13Q5XKP0 118 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 PFDN5Q99471 154 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 KCNIP2Q9NS61 270 aa16.06■□□□□ 0.16
SSNA1-202ENST00000459860 GIPP09681 153 aaPredicted RBP16.05■□□□□ 0.16
SSNA1-202ENST00000459860 PRR20EP86478 221 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 PRR20CP86479 221 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 PRR20DP86480 221 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 PRR20BP86481 221 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 PRR20AP86496 221 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 LINC00305Q7Z4B0 112 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 ZNF709Q8N972 641 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 CHAC2Q8WUX2 184 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 ATP5SQ99766 215 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 RSG1Q9BU20 258 aa16.05■□□□□ 0.16
SSNA1-202ENST00000459860 ISLRO14498 428 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 LYL1P12980 280 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 ACTL10Q5JWF8 245 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 PATE2Q6UY27 113 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 Q6ZWC4 215 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 C16orf92Q96LL3 132 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 LINC00052Q96N35 136 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 NPCDR1Q9BY65 106 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 CSTL1Q9H114 145 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 SLC39A9Q9NUM3 307 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 PXMP4Q9Y6I8 212 aa16.04■□□□□ 0.16
SSNA1-202ENST00000459860 DNAJC4Q9NNZ3 241 aa16.03■□□□□ 0.16
SSNA1-202ENST00000459860 KNCNA6PVL3 124 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 C17orf112F2Z3M2 114 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 SOCS3O14543 225 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 IFNA5P01569 189 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 DEFB135Q30KP9 77 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 WDR61Q9GZS3 305 aaKnown RBP16.02■□□□□ 0.16
SSNA1-202ENST00000459860 TP53TG1Q9Y2A0 90 aa16.02■□□□□ 0.16
SSNA1-202ENST00000459860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.01■□□□□ 0.15
SSNA1-202ENST00000459860 TRPT1Q86TN4 253 aaKnown RBP16.01■□□□□ 0.15
SSNA1-202ENST00000459860 BPIFA4PQ86YQ2 179 aa16.01■□□□□ 0.15
SSNA1-202ENST00000459860 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
SSNA1-202ENST00000459860 SMIM3Q9BZL3 60 aa16.01■□□□□ 0.15
SSNA1-202ENST00000459860 CA1P00915 261 aaPredicted RBP16■□□□□ 0.15
SSNA1-202ENST00000459860 SPP1P10451 314 aa16■□□□□ 0.15
SSNA1-202ENST00000459860 MORN3Q6PF18 240 aaPredicted RBP16■□□□□ 0.15
SSNA1-202ENST00000459860 LRRC20Q8TCA0 184 aa16■□□□□ 0.15
SSNA1-202ENST00000459860 SCGB1C1Q8TD33 95 aa16■□□□□ 0.15
SSNA1-202ENST00000459860 GATAD1Q8WUU5 269 aa16■□□□□ 0.15
SSNA1-202ENST00000459860 RPRMQ9NS64 109 aa16■□□□□ 0.15
SSNA1-202ENST00000459860 SPRY2O43597 315 aa15.99■□□□□ 0.15
SSNA1-202ENST00000459860 TMEM41BQ5BJD5 291 aa15.99■□□□□ 0.15
SSNA1-202ENST00000459860 CASC10Q5T4H9 136 aa15.99■□□□□ 0.15
SSNA1-202ENST00000459860 MUC7Q8TAX7 377 aa15.99■□□□□ 0.15
SSNA1-202ENST00000459860 OVOL2Q9BRP0 275 aa15.99■□□□□ 0.15
SSNA1-202ENST00000459860 A0A087X0K7 114 aa15.98■□□□□ 0.15
SSNA1-202ENST00000459860 NUTF2P61970 127 aaKnown RBP15.98■□□□□ 0.15
SSNA1-202ENST00000459860 EBLN2Q6P2I7 272 aa15.98■□□□□ 0.15
SSNA1-202ENST00000459860 FOXI2Q6ZQN5 318 aa15.98■□□□□ 0.15
SSNA1-202ENST00000459860 RNF183Q96D59 192 aa15.98■□□□□ 0.15
SSNA1-202ENST00000459860 TENM2Q9NT68 2774 aa15.98■□□□□ 0.15
SSNA1-202ENST00000459860 HLA-DRB4P13762 266 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 CXCL2P19875 107 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 SPATA31B1PQ5VZV4 182 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 OR2T35Q8NGX2 323 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 HLA-DRB4X5D2U9 266 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 AGRNO00468 2067 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 DNAH1Q9P2D7 4330 aa15.97■□□□□ 0.15
SSNA1-202ENST00000459860 EPPK1P58107 5090 aaKnown RBP15.96■□□□□ 0.15
SSNA1-202ENST00000459860 LCN15Q6UWW0 184 aa15.96■□□□□ 0.15
SSNA1-202ENST00000459860 INO80EQ8NBZ0 244 aaPredicted RBP15.96■□□□□ 0.15
SSNA1-202ENST00000459860 AQP10Q96PS8 301 aa15.96■□□□□ 0.15
SSNA1-202ENST00000459860 LYSTQ99698 3801 aa15.96■□□□□ 0.15
SSNA1-202ENST00000459860 SAV1Q9H4B6 383 aaPredicted RBP15.96■□□□□ 0.15
SSNA1-202ENST00000459860 FXYD6-FXYD2A0A087WZ82 144 aa15.95■□□□□ 0.14
SSNA1-202ENST00000459860 H3BMM0 161 aa15.95■□□□□ 0.14
SSNA1-202ENST00000459860 MORN5Q5VZ52 161 aa15.95■□□□□ 0.14
SSNA1-202ENST00000459860 PARD6GQ9BYG4 376 aaPredicted RBP15.95■□□□□ 0.14
SSNA1-202ENST00000459860 EDA2RQ9HAV5 297 aa15.95■□□□□ 0.14
SSNA1-202ENST00000459860 STARD9Q9P2P6 4700 aa15.95■□□□□ 0.14
SSNA1-202ENST00000459860 MRPS12O15235 138 aaKnown RBP15.94■□□□□ 0.14
SSNA1-202ENST00000459860 ZNF266Q14584 549 aa15.94■□□□□ 0.14
SSNA1-202ENST00000459860 FAM78BQ5VT40 261 aa15.94■□□□□ 0.14
SSNA1-202ENST00000459860 ZNF738Q8NE65 137 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms