RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CXCL3P19876 107 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 ID1P41134 155 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 ZFAND6Q6FIF0 208 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 OR5C1Q8NGR4 320 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 THAP6Q8TBB0 222 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 ASB13Q8WXK3 278 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 MGST2Q99735 147 aa15.21■□□□□ 0.03
VARS-218ENST00000459667 SOCS3O14543 225 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 MPDU1O75352 247 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 FGF7P21781 194 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 PSMB3P49720 205 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 NHLH2Q02577 135 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 SAMD13Q5VXD3 122 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 Q6ZRG5 221 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 UHRF2Q96PU4 802 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 SHANK2-AS3Q9BTD1 123 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 RNF126Q9BV68 326 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 MBD2Q9UBB5 411 aa15.2■□□□□ 0.02
VARS-218ENST00000459667 COX7A2P2O60397 106 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 SPP1P10451 314 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 MEOX2P50222 304 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 MORN3Q6PF18 240 aaPredicted RBP15.19■□□□□ 0.02
VARS-218ENST00000459667 OR11H7Q8NGC8 314 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 LINC00052Q96N35 136 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 RSG1Q9BU20 258 aa15.19■□□□□ 0.02
VARS-218ENST00000459667 ELOA3CA0A087WX78 387 aaPredicted RBP15.18■□□□□ 0.02
VARS-218ENST00000459667 ISLRO14498 428 aa15.18■□□□□ 0.02
VARS-218ENST00000459667 FGL1Q08830 312 aa15.18■□□□□ 0.02
VARS-218ENST00000459667 CLINT1Q14677 625 aa15.18■□□□□ 0.02
VARS-218ENST00000459667 IL17DQ8TAD2 202 aa15.18■□□□□ 0.02
VARS-218ENST00000459667 ARV1Q9H2C2 271 aa15.18■□□□□ 0.02
VARS-218ENST00000459667 A0A0J9YWU9 116 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 GIPP09681 153 aaPredicted RBP15.17■□□□□ 0.02
VARS-218ENST00000459667 RPL7P18124 248 aaKnown RBP15.17■□□□□ 0.02
VARS-218ENST00000459667 C4BPBP20851 252 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 RPL12P30050 165 aaKnown RBP15.17■□□□□ 0.02
VARS-218ENST00000459667 TMEM41BQ5BJD5 291 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 PATE2Q6UY27 113 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 OR1L4Q8NGR5 311 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 CHAC2Q8WUX2 184 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 C16orf92Q96LL3 132 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 HSPB11Q9Y547 144 aa15.17■□□□□ 0.02
VARS-218ENST00000459667 HLA-DRB4P13762 266 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 RPL29P47914 159 aaKnown RBP15.16■□□□□ 0.02
VARS-218ENST00000459667 OPCMLQ14982 345 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 MIC13Q5XKP0 118 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 C17orf77Q96MU5 243 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 PFDN5Q99471 154 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 RARRES2Q99969 163 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 KCNIP2Q9NS61 270 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 HLA-DRB4X5D2U9 266 aa15.16■□□□□ 0.02
VARS-218ENST00000459667 KMT2CQ8NEZ4 4911 aaKnown RBP15.16■□□□□ 0.02
VARS-218ENST00000459667 H3BMM0 161 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 GIG44P09565 113 aaPredicted RBP15.15■□□□□ 0.02
VARS-218ENST00000459667 ATF4P18848 351 aaPredicted RBP15.15■□□□□ 0.02
VARS-218ENST00000459667 DEFB1P60022 68 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 B2MP61769 119 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 PRR20EP86478 221 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 PRR20CP86479 221 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 PRR20DP86480 221 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 PRR20BP86481 221 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 PRR20AP86496 221 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 C10orf113Q5VZT2 155 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 FOXI2Q6ZQN5 318 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 LINC00305Q7Z4B0 112 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 OR11H2Q8NH07 326 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 ATP5SQ99766 215 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 NPCDR1Q9BY65 106 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 DNAJC4Q9NNZ3 241 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 SLC39A9Q9NUM3 307 aa15.15■□□□□ 0.02
VARS-218ENST00000459667 GDF5OSQ5U4N7 250 aa15.14■□□□□ 0.01
VARS-218ENST00000459667 SAV1Q9H4B6 383 aaPredicted RBP15.14■□□□□ 0.01
VARS-218ENST00000459667 PXMP4Q9Y6I8 212 aa15.14■□□□□ 0.01
VARS-218ENST00000459667 IFNA5P01569 189 aa15.13■□□□□ 0.01
VARS-218ENST00000459667 NUTF2P61970 127 aaKnown RBP15.13■□□□□ 0.01
VARS-218ENST00000459667 RPRMQ9NS64 109 aa15.13■□□□□ 0.01
VARS-218ENST00000459667 STARD9Q9P2P6 4700 aa15.13■□□□□ 0.01
VARS-218ENST00000459667 C17orf112F2Z3M2 114 aa15.12■□□□□ 0.01
VARS-218ENST00000459667 SCGB1C1Q8TD33 95 aa15.12■□□□□ 0.01
VARS-218ENST00000459667 TMEM37Q8WXS4 190 aa15.12■□□□□ 0.01
VARS-218ENST00000459667 C20orf173Q96LM9 149 aa15.12■□□□□ 0.01
VARS-218ENST00000459667 WDR61Q9GZS3 305 aaKnown RBP15.12■□□□□ 0.01
VARS-218ENST00000459667 CLEC5AQ9NY25 188 aa15.12■□□□□ 0.01
VARS-218ENST00000459667 A0A087X0K7 114 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 SPATA31B1PQ5VZV4 182 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 EBLN2Q6P2I7 272 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 BPIFA4PQ86YQ2 179 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 C1QTNF4Q9BXJ3 329 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 SMIM3Q9BZL3 60 aa15.11■□□□□ 0.01
VARS-218ENST00000459667 CSMD3Q7Z407 3707 aa15.1■□□□□ 0.01
VARS-218ENST00000459667 F6UB75 175 aa15.1■□□□□ 0.01
VARS-218ENST00000459667 IGKV3-20P01619 116 aa15.1■□□□□ 0.01
VARS-218ENST00000459667 OR4B1Q8NGF8 309 aa15.1■□□□□ 0.01
VARS-218ENST00000459667 TRAV8-2A0A0B4J237 113 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 A0A0J9YX75 114 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 MRPS12O15235 138 aaKnown RBP15.09■□□□□ 0.01
VARS-218ENST00000459667 MORN5Q5VZ52 161 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 354.1 ms