RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 PLNP26678 52 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 FOXA3P55318 350 aaPredicted RBP4.47□□□□□ -1.69
HMGB4-202ENST00000458277 EDDM3BP56851 147 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 CACNG7P62955 275 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 FHL3Q13643 280 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 FXYD3Q14802 87 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 IZUMO4Q1ZYL8 232 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 PLPP4Q5VZY2 271 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 PCSK4Q6UW60 755 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 LINC00643Q86TS7 51 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 DRAM1Q8N682 238 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 RNF152Q8N8N0 203 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 OR8A1Q8NGG7 326 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 SPTSSAQ969W0 71 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TRGV9Q99603 122 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 HDHD3Q9BSH5 251 aaPredicted RBP4.47□□□□□ -1.69
HMGB4-202ENST00000458277 SLC25A39Q9BZJ4 359 aaPredicted RBP4.47□□□□□ -1.69
HMGB4-202ENST00000458277 SPRY4Q9C004 299 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 AICDAQ9GZX7 198 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 AAMDCQ9H7C9 122 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 CCL28Q9NRJ3 127 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 LSM7Q9UK45 103 aaKnown RBP4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TRPM6Q9BX84 2022 aa4.46□□□□□ -1.69
HMGB4-202ENST00000458277 IGKV1-9A0A0C4DH69 117 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 A0A1W2PQD3 144 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 TMEM202A6NGA9 273 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 SH2D7A6NKC9 451 aaPredicted RBP4.46□□□□□ -1.7
HMGB4-202ENST00000458277 H3BMM0 161 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 H3BT86 120 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 K7EQS6 105 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 LGALS9O00182 355 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 CLDN14O95500 239 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 P01737 135 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 CD7P09564 240 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 P0DMU3 169 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 FAM231AP0DMU4 169 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 FAM231CP0DMU5 169 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 CRYGSP22914 178 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 LOXL3P58215 753 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 TFF3Q07654 80 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 TXNDC8Q6A555 127 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 C22orf39Q6P5X5 142 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 LINC00173Q6ZV60 143 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 Q6ZVL8 140 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 FGFRL1Q8N441 504 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 UBE2WQ96B02 151 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 DEFB118Q96PH6 123 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 DYNLRB1Q9NP97 96 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF355PQ9NSJ1 428 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 OCIAD1Q9NX40 245 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
HMGB4-202ENST00000458277 F11RQ9Y624 299 aaKnown RBP4.46□□□□□ -1.7
HMGB4-202ENST00000458277 SCN3AQ9NY46 2000 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 DNAH12Q6ZR08 3092 aa4.46□□□□□ -1.7
HMGB4-202ENST00000458277 SCN10AQ9Y5Y9 1956 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 A0A1B0GUT8 65 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 H3BVH4 76 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 K7ERJ3 54 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 IGLV2-8P01709 118 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 FRMD6-AS1P0C7T7 363 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 LINC00271P0C7V0 271 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 PYYP10082 97 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 FKBP2P26885 142 aaKnown RBP4.45□□□□□ -1.7
HMGB4-202ENST00000458277 UBE2D1P51668 147 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
HMGB4-202ENST00000458277 FAM53BQ14153 422 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 EBI3Q14213 229 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 DEFB121Q5J5C9 76 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF493Q6ZR52 646 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 RPS19BP1Q86WX3 136 aaKnown RBP4.45□□□□□ -1.7
HMGB4-202ENST00000458277 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 FMC1Q96HJ9 113 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 CYYR1Q96J86 154 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF488Q96MN9 340 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 SPACA5Q96QH8 159 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 CHCHD5Q9BSY4 110 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 PRSS22Q9GZN4 317 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 AGPAT4-IT1Q9H0P7 198 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 NXT2Q9NPJ8 142 aaKnown RBP4.45□□□□□ -1.7
HMGB4-202ENST00000458277 AMMECR1Q9Y4X0 333 aaPredicted RBP4.45□□□□□ -1.7
HMGB4-202ENST00000458277 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
HMGB4-202ENST00000458277 TRBV7-3A0A075B6L6 115 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TRAV17A0A0B4J275 112 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 OOSP1A8MZH6 123 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF561-AS1K7EIQ3 104 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 NXPH3O95157 252 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1-5P01602 117 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 COX6A1P12074 109 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 FCER1GP30273 86 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 CCL8P80075 99 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms