RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PRSS46E5RG02 174 aa15.21■□□□□ 0.03
CPNE1-220ENST00000458038 INSP01308 110 aa15.21■□□□□ 0.03
CPNE1-220ENST00000458038 ORM2P19652 201 aa15.21■□□□□ 0.03
CPNE1-220ENST00000458038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.21■□□□□ 0.03
CPNE1-220ENST00000458038 DEDD2Q8WXF8 326 aa15.21■□□□□ 0.03
CPNE1-220ENST00000458038 SLC25A21Q9BQT8 299 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-220ENST00000458038 CNN1P51911 297 aaKnown RBP15.2■□□□□ 0.02
CPNE1-220ENST00000458038 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
CPNE1-220ENST00000458038 C17orf77Q96MU5 243 aa15.2■□□□□ 0.02
CPNE1-220ENST00000458038 ATG101Q9BSB4 218 aa15.2■□□□□ 0.02
CPNE1-220ENST00000458038 VAMP1P23763 118 aa15.19■□□□□ 0.02
CPNE1-220ENST00000458038 TMEM144Q7Z5S9 345 aa15.19■□□□□ 0.02
CPNE1-220ENST00000458038 S100A7AQ86SG5 101 aa15.19■□□□□ 0.02
CPNE1-220ENST00000458038 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
CPNE1-220ENST00000458038 STRAPQ9Y3F4 350 aaKnown RBP15.19■□□□□ 0.02
CPNE1-220ENST00000458038 DNAH11Q96DT5 4516 aa15.19■□□□□ 0.02
CPNE1-220ENST00000458038 WRBO00258 174 aa15.18■□□□□ 0.02
CPNE1-220ENST00000458038 AKR1C1Q04828 323 aa15.18■□□□□ 0.02
CPNE1-220ENST00000458038 SPINK13Q1W4C9 94 aa15.18■□□□□ 0.02
CPNE1-220ENST00000458038 TMEM256Q8N2U0 113 aa15.18■□□□□ 0.02
CPNE1-220ENST00000458038 TOMM5Q8N4H5 51 aa15.18■□□□□ 0.02
CPNE1-220ENST00000458038 ZNF705GA8MUZ8 300 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-220ENST00000458038 M0R2Z0 102 aa15.17■□□□□ 0.02
CPNE1-220ENST00000458038 CRXO43186 299 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-220ENST00000458038 NOL3O60936 208 aaKnown RBP15.17■□□□□ 0.02
CPNE1-220ENST00000458038 SFT2D2O95562 160 aa15.17■□□□□ 0.02
CPNE1-220ENST00000458038 RPL7P18124 248 aaKnown RBP15.17■□□□□ 0.02
CPNE1-220ENST00000458038 SPANXN5Q5MJ07 72 aa15.17■□□□□ 0.02
CPNE1-220ENST00000458038 RNF24Q9Y225 148 aa15.17■□□□□ 0.02
CPNE1-220ENST00000458038 GATA2P23769 480 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-220ENST00000458038 RAP2BP61225 183 aa15.16■□□□□ 0.02
CPNE1-220ENST00000458038 MCFD2Q8NI22 146 aa15.16■□□□□ 0.02
CPNE1-220ENST00000458038 SLC25A39Q9BZJ4 359 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-220ENST00000458038 DYNC1H1Q14204 4646 aaKnown RBP15.15■□□□□ 0.02
CPNE1-220ENST00000458038 TRAV8-2A0A0B4J237 113 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 BOLA2-SMG1P6H3BVE0 249 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 SELENOTP62341 195 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 TMEM182Q6ZP80 229 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-220ENST00000458038 ZNF575Q86XF7 245 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 ZNF738Q8NE65 137 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 TRIM63Q969Q1 353 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 SHANK2-AS3Q9BTD1 123 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 HIGD1AQ9Y241 93 aa15.15■□□□□ 0.02
CPNE1-220ENST00000458038 CBY3A6NI87 242 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 H3BRN7 92 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 HYPMO75409 117 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 IL5P05113 134 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 ATP5G1P05496 136 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 HOXB5P09067 269 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 DEFB130BP0DP73 79 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 DEFB130AP0DP74 79 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 ATP5G3P48201 142 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 CCL18P55774 89 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 PLP1P60201 277 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 UBE2MP61081 183 aaKnown RBP15.14■□□□□ 0.01
CPNE1-220ENST00000458038 FGL1Q08830 312 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 PYDC2Q56P42 97 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 CYP2G1PQ6ZSU1 146 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 ACOT7LQ6ZUV0 252 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 RNF182Q8N6D2 247 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 PPP1R14DQ9NXH3 145 aa15.14■□□□□ 0.01
CPNE1-220ENST00000458038 NBDYA0A0U1RRE5 68 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 F5H768 121 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 TAS2R60P59551 318 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 PPP1R1AQ13522 171 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 BAP18Q8IXM2 172 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 LINC01587Q99440 93 aa15.13■□□□□ 0.01
CPNE1-220ENST00000458038 H3BMQ9 156 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 ID3Q02535 119 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 IGFL4Q6B9Z1 124 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 ZNF493Q6ZR52 646 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 OR8A1Q8NGG7 326 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 ZNRF2Q8NHG8 242 aa15.12■□□□□ 0.01
CPNE1-220ENST00000458038 A0A087X0K7 114 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 PLAC8L1A1L4L8 177 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 SMCO3A2RU48 225 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 NUDT3O95989 172 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 PRM2P04554 102 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 RHOBP62745 196 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 PSG3Q16557 428 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 C6orf223Q8N319 242 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 LRRC20Q8TCA0 184 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 C16orf74Q96GX8 76 aa15.11■□□□□ 0.01
CPNE1-220ENST00000458038 TIMM8BQ9Y5J9 83 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-220ENST00000458038 FNDC10F2Z333 226 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 H3BP45 60 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 OR5G3P0C626 314 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 LINC00869P0C866 280 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 CXCL3P19876 107 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 AZU1P20160 251 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 HIST1H1AQ02539 215 aaPredicted RBP15.1■□□□□ 0.01
CPNE1-220ENST00000458038 PSENENQ9NZ42 101 aa15.1■□□□□ 0.01
CPNE1-220ENST00000458038 TRAV12-2A0A075B6T6 113 aa15.09■□□□□ 0.01
CPNE1-220ENST00000458038 CDK2AP2O75956 126 aa15.09■□□□□ 0.01
CPNE1-220ENST00000458038 PXDC1Q5TGL8 231 aa15.09■□□□□ 0.01
CPNE1-220ENST00000458038 NPVFQ9HCQ7 196 aa15.09■□□□□ 0.01
CPNE1-220ENST00000458038 C16orf90A8MZG2 172 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 K7EPK0 472 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 CXCL2P19875 107 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 DLK1P80370 383 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms