RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 PFDN5Q99471 154 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 B9D2Q9BPU9 175 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 MAP6D1Q9H9H5 199 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 KCNIP2Q9NS61 270 aa10.5□□□□□ -0.73
SMPD4-215ENST00000457039 HUWE1Q7Z6Z7 4374 aaKnown RBP10.5□□□□□ -0.73
SMPD4-215ENST00000457039 HMSDA8MTL9 139 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 SOCS3O14543 225 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
SMPD4-215ENST00000457039 ARPC5O15511 151 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 CMC4P56277 68 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-215ENST00000457039 ZNF266Q14584 549 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 SCGB1C1Q8TD33 95 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 GATAD1Q8WUU5 269 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
SMPD4-215ENST00000457039 SEPSECSQ9HD40 501 aaKnown RBP10.49□□□□□ -0.73
SMPD4-215ENST00000457039 hCG_2014768A0A024R1R8 64 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
SMPD4-215ENST00000457039 GALR1P47211 349 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 TCTE3Q8IZS6 198 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 ZNF709Q8N972 641 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 MFFQ9GZY8 342 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RNF24Q9Y225 148 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 RFNGQ9Y644 331 aa10.48□□□□□ -0.73
SMPD4-215ENST00000457039 A0A087X0K7 114 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 A0A1B0GVG6 124 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 DEFB131AP59861 70 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 ZNF345Q14585 488 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 ZNF124Q15973 351 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 TIMM9Q9Y5J7 89 aa10.47□□□□□ -0.73
SMPD4-215ENST00000457039 TRAV5A0A0B4J249 113 aa10.46□□□□□ -0.73
SMPD4-215ENST00000457039 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
SMPD4-215ENST00000457039 MEOX2P50222 304 aa10.46□□□□□ -0.73
SMPD4-215ENST00000457039 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
SMPD4-215ENST00000457039 KCNRGQ8N5I3 272 aa10.46□□□□□ -0.73
SMPD4-215ENST00000457039 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
SMPD4-215ENST00000457039 ISLRO14498 428 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 TAAR5O14804 337 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 IGLC2P0DOY2 106 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 ATP6V0CP27449 155 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 PSMB3P49720 205 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 FFAR4Q5NUL3 377 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 FAM78BQ5VT40 261 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 SAMD13Q5VXD3 122 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 SBSPONQ8IVN8 264 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 HSD17B11Q8NBQ5 300 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 PSMG3Q9BT73 122 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-215ENST00000457039 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
SMPD4-215ENST00000457039 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
SMPD4-215ENST00000457039 CXCL2P19875 107 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 SNRPD3P62318 126 aaKnown RBP10.44□□□□□ -0.74
SMPD4-215ENST00000457039 HAGHQ16775 308 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 MIR17HGQ75NE6 70 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 OR2G3Q8NGZ4 309 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 ASCL2Q99929 193 aa10.44□□□□□ -0.74
SMPD4-215ENST00000457039 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
SMPD4-215ENST00000457039 TGP01266 2768 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-215ENST00000457039 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 JTBO76095 146 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 C1QBP02746 253 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 ID1P41134 155 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 AKAP14Q86UN6 197 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
SMPD4-215ENST00000457039 A0A0D9SG52 128 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 H3BQ15 152 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 M6PRP20645 277 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 CD300CQ08708 224 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-215ENST00000457039 ARPC5LQ9BPX5 153 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 HRH4Q9H3N8 390 aa10.42□□□□□ -0.74
SMPD4-215ENST00000457039 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 NHLRC4P0CG21 123 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-215ENST00000457039 RAB2AP61019 212 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 RHOBP62745 196 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 SERF2P84101 59 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 IGFL4Q6B9Z1 124 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 LCN15Q6UWW0 184 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 TRPT1Q86TN4 253 aaKnown RBP10.41□□□□□ -0.74
SMPD4-215ENST00000457039 GNPNAT1Q96EK6 184 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms