RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PET100P0DJ07 73 aa17■□□□□ 0.31
CBX3-204ENST00000456948 CAMLGP49069 296 aa17■□□□□ 0.31
CBX3-204ENST00000456948 OR11H2Q8NH07 326 aa17■□□□□ 0.31
CBX3-204ENST00000456948 ELOA3CA0A087WX78 387 aaPredicted RBP16.99■□□□□ 0.31
CBX3-204ENST00000456948 H3BRN7 92 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 COX7A2P2O60397 106 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 EBLN2Q6P2I7 272 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 ARV1Q9H2C2 271 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 RPRMQ9NS64 109 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 AGRNO00468 2067 aa16.99■□□□□ 0.31
CBX3-204ENST00000456948 A0A0J9YWU9 116 aa16.98■□□□□ 0.31
CBX3-204ENST00000456948 LRRC37A5PQ49AS3 106 aa16.98■□□□□ 0.31
CBX3-204ENST00000456948 FOXI2Q6ZQN5 318 aa16.98■□□□□ 0.31
CBX3-204ENST00000456948 SCRT1Q9BWW7 348 aa16.98■□□□□ 0.31
CBX3-204ENST00000456948 H3BMM0 161 aa16.97■□□□□ 0.31
CBX3-204ENST00000456948 PTTG1O95997 202 aa16.97■□□□□ 0.31
CBX3-204ENST00000456948 BAXQ07812 192 aa16.97■□□□□ 0.31
CBX3-204ENST00000456948 FGL1Q08830 312 aa16.97■□□□□ 0.31
CBX3-204ENST00000456948 MGST2Q99735 147 aa16.97■□□□□ 0.31
CBX3-204ENST00000456948 IGSF23A1L1A6 192 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 MPDU1O75352 247 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 HLA-DRB4P13762 266 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 VWC2Q2TAL6 325 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 OR1L4Q8NGR5 311 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 LRRC20Q8TCA0 184 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 SAV1Q9H4B6 383 aaPredicted RBP16.96■□□□□ 0.31
CBX3-204ENST00000456948 WDR83OSQ9Y284 106 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 HLA-DRB4X5D2U9 266 aa16.96■□□□□ 0.31
CBX3-204ENST00000456948 UBE2L5PA0A1B0GUS4 154 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 SOCS3O14543 225 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 C10orf113Q5VZT2 155 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 LINC00305Q7Z4B0 112 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 UHRF2Q96PU4 802 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 PFDN5Q99471 154 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 DNAJC4Q9NNZ3 241 aa16.95■□□□□ 0.3
CBX3-204ENST00000456948 PPP1R1CQ8WVI7 109 aa16.94■□□□□ 0.3
CBX3-204ENST00000456948 FGF7P21781 194 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 RPL29P47914 159 aaKnown RBP16.93■□□□□ 0.3
CBX3-204ENST00000456948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 PATE2Q6UY27 113 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 BPIFA4PQ86YQ2 179 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 OR4B1Q8NGF8 309 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 CLUHP3Q96NS8 147 aa16.93■□□□□ 0.3
CBX3-204ENST00000456948 H2BFSP57053 126 aa16.92■□□□□ 0.3
CBX3-204ENST00000456948 EWSR1Q01844 656 aaKnown RBP eCLIP16.92■□□□□ 0.3
CBX3-204ENST00000456948 OR5C1Q8NGR4 320 aa16.92■□□□□ 0.3
CBX3-204ENST00000456948 CHAC2Q8WUX2 184 aa16.92■□□□□ 0.3
CBX3-204ENST00000456948 A0A087X0K7 114 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 CXorf65A6NEN9 183 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 B2MP61769 119 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 NHLH2Q02577 135 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 ZNF709Q8N972 641 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 C11orf68Q9H3H3 251 aaKnown RBP16.91■□□□□ 0.3
CBX3-204ENST00000456948 KCNIP2Q9NS61 270 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 SLC39A9Q9NUM3 307 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 OR5AC2Q9NZP5 309 aa16.91■□□□□ 0.3
CBX3-204ENST00000456948 DUSP14O95147 198 aaKnown RBP16.9■□□□□ 0.3
CBX3-204ENST00000456948 MIFP14174 115 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 CXCL2P19875 107 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 C4BPBP20851 252 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 PRR20EP86478 221 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 PRR20CP86479 221 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 PRR20DP86480 221 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 PRR20BP86481 221 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 PRR20AP86496 221 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 MIC13Q5XKP0 118 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 MFFQ9GZY8 342 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 RYR3Q15413 4870 aa16.9■□□□□ 0.3
CBX3-204ENST00000456948 MPC2O95563 127 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 IGKV3-20P01619 116 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 GIG44P09565 113 aaPredicted RBP16.89■□□□□ 0.29
CBX3-204ENST00000456948 PSG9Q00887 426 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 OPCMLQ14982 345 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 LCN15Q6UWW0 184 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 TMEM37Q8WXS4 190 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 XCL2Q9UBD3 114 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 PXMP4Q9Y6I8 212 aa16.89■□□□□ 0.29
CBX3-204ENST00000456948 A0A0J9YX75 114 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 NUPR2A6NF83 97 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 GDF5OSQ5U4N7 250 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 SLC50A1Q9BRV3 221 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 MED28Q9H204 178 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 CLEC5AQ9NY25 188 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 ALG5Q9Y673 324 aa16.88■□□□□ 0.29
CBX3-204ENST00000456948 ZNF705EA8MWA4 302 aaPredicted RBP16.87■□□□□ 0.29
CBX3-204ENST00000456948 H0YIZ8 118 aa16.87■□□□□ 0.29
CBX3-204ENST00000456948 FAM78BQ5VT40 261 aa16.87■□□□□ 0.29
CBX3-204ENST00000456948 ZNF738Q8NE65 137 aa16.87■□□□□ 0.29
CBX3-204ENST00000456948 C11orf45Q8TAV5 145 aa16.87■□□□□ 0.29
CBX3-204ENST00000456948 NPCDR1Q9BY65 106 aa16.87■□□□□ 0.29
CBX3-204ENST00000456948 C17orf112F2Z3M2 114 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 PMS2P11Q13670 270 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 CLINT1Q14677 625 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 GUK1Q16774 197 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 CSNK1G2-AS1Q8NCQ2 148 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 THAP6Q8TBB0 222 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 C20orf173Q96LM9 149 aa16.86■□□□□ 0.29
CBX3-204ENST00000456948 KLK5Q9Y337 293 aaPredicted RBP16.86■□□□□ 0.29
CBX3-204ENST00000456948 JTBO76095 146 aa16.85■□□□□ 0.29
CBX3-204ENST00000456948 C17orf77Q96MU5 243 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms