RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
CPSF6-203ENST00000456847 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
CPSF6-203ENST00000456847 GOSR2O14653 212 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 FXYD7P58549 80 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 SACSQ9NZJ4 4579 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 ZNF705EA8MWA4 302 aaPredicted RBP11.78□□□□□ -0.52
CPSF6-203ENST00000456847 DEDDO75618 318 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 PLP1P60201 277 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 UHRF2Q96PU4 802 aa11.78□□□□□ -0.52
CPSF6-203ENST00000456847 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
CPSF6-203ENST00000456847 CST7O76096 145 aa11.77□□□□□ -0.53
CPSF6-203ENST00000456847 RPL7P18124 248 aaKnown RBP11.77□□□□□ -0.53
CPSF6-203ENST00000456847 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
CPSF6-203ENST00000456847 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
CPSF6-203ENST00000456847 X6R8D5 127 aa11.77□□□□□ -0.53
CPSF6-203ENST00000456847 F6UB75 175 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 AGPAT2O15120 278 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RBMY1A1P0DJD3 496 aaKnown RBP11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RBMY1CP0DJD4 496 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RAB32Q13637 225 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RBMY1FQ15415 496 aaKnown RBP11.76□□□□□ -0.53
CPSF6-203ENST00000456847 C20orf173Q96LM9 149 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RYR2Q92736 4967 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 PXDC1Q5TGL8 231 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
CPSF6-203ENST00000456847 LYSTQ99698 3801 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 COX7A2P2O60397 106 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 LY6G6CO95867 125 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 RAB31Q13636 194 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 FAM78BQ5VT40 261 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 STX12Q86Y82 276 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 LINC00476Q8WZB0 136 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 MGST2Q99735 147 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 C11orf1Q9H5F2 150 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 UQCC1Q9NVA1 299 aa11.75□□□□□ -0.53
CPSF6-203ENST00000456847 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 A0A0J9YX75 114 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 PSG9Q00887 426 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 IFITM3Q01628 133 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 IGFL4Q6B9Z1 124 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 NRARPQ7Z6K4 114 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 LRRC20Q8TCA0 184 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 SLC35B3Q9H1N7 401 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 LYRM2Q9NU23 88 aaPredicted RBP11.74□□□□□ -0.53
CPSF6-203ENST00000456847 UBE2L5PA0A1B0GUS4 154 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 INMT-MINDY4F8WBC2 141 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 PRAF2O60831 178 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 CAMLGP49069 296 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 DEFA1P59665 94 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 DEFA3P59666 94 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 C17orf77Q96MU5 243 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 BATF3Q9NR55 127 aa11.74□□□□□ -0.53
CPSF6-203ENST00000456847 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 SIX6O95475 246 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 SULT1A1P50225 295 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 HBG1P69891 147 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 HBG2P69892 147 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 BAXQ07812 192 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
CPSF6-203ENST00000456847 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
CPSF6-203ENST00000456847 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 A0A087X0K7 114 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 DUSP14O95147 198 aaKnown RBP11.72□□□□□ -0.53
CPSF6-203ENST00000456847 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 S100A11P31949 105 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 IL15RAQ13261 267 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 Q6ZRG5 221 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 GOLT1BQ9Y3E0 138 aa11.72□□□□□ -0.53
CPSF6-203ENST00000456847 RLN2P04090 185 aa11.71□□□□□ -0.53
CPSF6-203ENST00000456847 LRRC37A5PQ49AS3 106 aa11.71□□□□□ -0.53
CPSF6-203ENST00000456847 MIC13Q5XKP0 118 aa11.71□□□□□ -0.53
CPSF6-203ENST00000456847 C2CD4CQ8TF44 421 aa11.71□□□□□ -0.53
CPSF6-203ENST00000456847 C11orf94C9JXX5 98 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
CPSF6-203ENST00000456847 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
CPSF6-203ENST00000456847 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
CPSF6-203ENST00000456847 FGF7P21781 194 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
CPSF6-203ENST00000456847 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 BPIFA4PQ86YQ2 179 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 OR1L4Q8NGR5 311 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 NEU1Q99519 415 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 CELA1Q9UNI1 258 aa11.7□□□□□ -0.54
CPSF6-203ENST00000456847 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
CPSF6-203ENST00000456847 SSNA1O43805 119 aa11.69□□□□□ -0.54
CPSF6-203ENST00000456847 EMP1P54849 157 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms