RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 GGACTQ9BVM4 153 aa15.36■□□□□ 0.05
HMGB3-205ENST00000455596 K7EPK0 472 aa15.35■□□□□ 0.05
HMGB3-205ENST00000455596 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.35■□□□□ 0.05
HMGB3-205ENST00000455596 S100A7AQ86SG5 101 aa15.35■□□□□ 0.05
HMGB3-205ENST00000455596 C2orf50Q96LR7 162 aa15.35■□□□□ 0.05
HMGB3-205ENST00000455596 SACSQ9NZJ4 4579 aa15.35■□□□□ 0.05
HMGB3-205ENST00000455596 ELOA3CA0A087WX78 387 aaPredicted RBP15.34■□□□□ 0.05
HMGB3-205ENST00000455596 FXYD7P58549 80 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 SLC38A11Q08AI6 406 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 ARL16Q0P5N6 197 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 ASAH1Q13510 395 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 C17orf77Q96MU5 243 aa15.34■□□□□ 0.05
HMGB3-205ENST00000455596 A0A0J9YX75 114 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 A6NHS1 94 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 C11orf94C9JXX5 98 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 F6UB75 175 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 DEDDO75618 318 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 RPL7P18124 248 aaKnown RBP15.33■□□□□ 0.04
HMGB3-205ENST00000455596 BCAP31P51572 246 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 C2CD4CQ8TF44 421 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 UHRF2Q96PU4 802 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 ARL6Q9H0F7 186 aa15.33■□□□□ 0.04
HMGB3-205ENST00000455596 GOSR2O14653 212 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 PVALBP20472 110 aaPredicted RBP15.32■□□□□ 0.04
HMGB3-205ENST00000455596 CAV2P51636 162 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 PSG9Q00887 426 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 FGL1Q08830 312 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 PXDC1Q5TGL8 231 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 FAM78BQ5VT40 261 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF705AQ6ZN79 300 aaPredicted RBP15.32■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF546Q86UE3 836 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF709Q8N972 641 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 RNF24Q9Y225 148 aa15.32■□□□□ 0.04
HMGB3-205ENST00000455596 AGPAT2O15120 278 aa15.31■□□□□ 0.04
HMGB3-205ENST00000455596 HLA-DMBP28068 263 aa15.31■□□□□ 0.04
HMGB3-205ENST00000455596 NEU1Q99519 415 aa15.31■□□□□ 0.04
HMGB3-205ENST00000455596 SLC35B3Q9H1N7 401 aa15.31■□□□□ 0.04
HMGB3-205ENST00000455596 ARV1Q9H2C2 271 aa15.31■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF705FA8MVS1 300 aaPredicted RBP15.3■□□□□ 0.04
HMGB3-205ENST00000455596 UPK1BO75841 260 aa15.3■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF705DP0CH99 300 aaPredicted RBP15.3■□□□□ 0.04
HMGB3-205ENST00000455596 ZNF705BP0CI00 300 aaPredicted RBP15.3■□□□□ 0.04
HMGB3-205ENST00000455596 PATE2Q6UY27 113 aa15.3■□□□□ 0.04
HMGB3-205ENST00000455596 ENKURQ8TC29 256 aa15.3■□□□□ 0.04
HMGB3-205ENST00000455596 C11orf1Q9H5F2 150 aa15.3■□□□□ 0.04
HMGB3-205ENST00000455596 PTTG2Q9NZH5 202 aa15.3■□□□□ 0.04
HMGB3-205ENST00000455596 IGHV3OR16-12A0A075B7B8 117 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 FAM24AA6NFZ4 105 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 SMIM9A6NGZ8 99 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 TCTAP57738 103 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 S100A10P60903 97 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 IGFL4Q6B9Z1 124 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 MGST2Q99735 147 aa15.29■□□□□ 0.04
HMGB3-205ENST00000455596 A0A087X0K7 114 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 TRAV8-2A0A0B4J237 113 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 TRAV10A0A0B4J240 114 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 CST7O76096 145 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 RAB32Q13637 225 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 LGALS9CQ6DKI2 356 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 Q6ZTC4 211 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 RNF182Q8N6D2 247 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 GPN1Q9HCN4 374 aaPredicted RBP15.28■□□□□ 0.04
HMGB3-205ENST00000455596 CELA1Q9UNI1 258 aa15.28■□□□□ 0.04
HMGB3-205ENST00000455596 A8MTW9 85 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 IGLL5B9A064 214 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 DUSP14O95147 198 aaKnown RBP15.27■□□□□ 0.04
HMGB3-205ENST00000455596 IL15RAQ13261 267 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 RAB31Q13636 194 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 LINC00305Q7Z4B0 112 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 LYRM2Q9NU23 88 aaPredicted RBP15.27■□□□□ 0.04
HMGB3-205ENST00000455596 GOLT1BQ9Y3E0 138 aa15.27■□□□□ 0.04
HMGB3-205ENST00000455596 ALMS1Q8TCU4 4167 aa15.27■□□□□ 0.03
HMGB3-205ENST00000455596 DNAH1Q9P2D7 4330 aa15.27■□□□□ 0.03
HMGB3-205ENST00000455596 TMEM189A5PLL7 270 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 COX7A2P2O60397 106 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 CAMLGP49069 296 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 ZNF738Q8NE65 137 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 LRRC20Q8TCA0 184 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 UQCC1Q9NVA1 299 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 RFNGQ9Y644 331 aa15.26■□□□□ 0.03
HMGB3-205ENST00000455596 SULT1A1P50225 295 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 CNN1P51911 297 aaKnown RBP15.25■□□□□ 0.03
HMGB3-205ENST00000455596 C12orf74Q32Q52 190 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 AMTNQ6UX39 209 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 NRARPQ7Z6K4 114 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 STX12Q86Y82 276 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 TMEM252Q8N6L7 170 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 HYDINQ4G0P3 5121 aa15.25■□□□□ 0.03
HMGB3-205ENST00000455596 MRPS12O15235 138 aaKnown RBP15.24■□□□□ 0.03
HMGB3-205ENST00000455596 AMBPP02760 352 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 CXCL3P19876 107 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 S100A11P31949 105 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 HBG1P69891 147 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 HBG2P69892 147 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 IFITM3Q01628 133 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 VWC2Q2TAL6 325 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 C10orf113Q5VZT2 155 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 Q6ZRG5 221 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 ZNF767PQ75MW2 155 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms