RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SRPXP78539 464 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 FCN2Q15485 313 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 BAP18Q8IXM2 172 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 OR1S1Q8NH92 325 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 RNF141Q8WVD5 230 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 GPR82Q96P67 336 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 SCGB3A2Q96PL1 93 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 SLC25A22Q9H936 323 aa13.03□□□□□ -0.32
MSH6-206ENST00000455383 IGFL4Q6B9Z1 124 aa13.02□□□□□ -0.33
MSH6-206ENST00000455383 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
MSH6-206ENST00000455383 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
MSH6-206ENST00000455383 SCP2D1Q9UJQ7 156 aa13.02□□□□□ -0.33
MSH6-206ENST00000455383 BOLA2-SMG1P6H3BVE0 249 aa13.01□□□□□ -0.33
MSH6-206ENST00000455383 RGS5O15539 181 aa13.01□□□□□ -0.33
MSH6-206ENST00000455383 SCRT2Q9NQ03 307 aa13.01□□□□□ -0.33
MSH6-206ENST00000455383 RABL2AQ9UBK7 228 aaPredicted RBP13.01□□□□□ -0.33
MSH6-206ENST00000455383 RABL2BQ9UNT1 228 aa13.01□□□□□ -0.33
MSH6-206ENST00000455383 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
MSH6-206ENST00000455383 DUXBA0A1W2PPF3 345 aa13□□□□□ -0.33
MSH6-206ENST00000455383 IAPPP10997 89 aa13□□□□□ -0.33
MSH6-206ENST00000455383 ANXA3P12429 323 aa13□□□□□ -0.33
MSH6-206ENST00000455383 GATA2P23769 480 aaPredicted RBP13□□□□□ -0.33
MSH6-206ENST00000455383 TAS2R60P59551 318 aa13□□□□□ -0.33
MSH6-206ENST00000455383 SSX7Q7RTT5 188 aa13□□□□□ -0.33
MSH6-206ENST00000455383 TMEM256Q8N2U0 113 aa13□□□□□ -0.33
MSH6-206ENST00000455383 RNF182Q8N6D2 247 aa13□□□□□ -0.33
MSH6-206ENST00000455383 Q9H8V8 135 aa13□□□□□ -0.33
MSH6-206ENST00000455383 PIGBOS1A0A0B4J2F0 54 aa12.99□□□□□ -0.33
MSH6-206ENST00000455383 SLC25A6P12236 298 aa12.99□□□□□ -0.33
MSH6-206ENST00000455383 ORM2P19652 201 aa12.99□□□□□ -0.33
MSH6-206ENST00000455383 BPIFCQ8NFQ6 507 aa12.99□□□□□ -0.33
MSH6-206ENST00000455383 KRTAP1-5Q9BYS1 174 aa12.99□□□□□ -0.33
MSH6-206ENST00000455383 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
MSH6-206ENST00000455383 H3BRN7 92 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 S100A7P31151 101 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 KRTAP10-2P60368 255 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 IL18Q14116 193 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 C16orf74Q96GX8 76 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 LINC01587Q99440 93 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 TMEM147Q9BVK8 224 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 FAT1Q14517 4588 aa12.98□□□□□ -0.33
MSH6-206ENST00000455383 BTF3P20290 206 aaKnown RBP12.97□□□□□ -0.33
MSH6-206ENST00000455383 CLINT1Q14677 625 aa12.97□□□□□ -0.33
MSH6-206ENST00000455383 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
MSH6-206ENST00000455383 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
MSH6-206ENST00000455383 OR8A1Q8NGG7 326 aa12.97□□□□□ -0.33
MSH6-206ENST00000455383 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
MSH6-206ENST00000455383 DIRAS2Q96HU8 199 aa12.97□□□□□ -0.33
MSH6-206ENST00000455383 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
MSH6-206ENST00000455383 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
MSH6-206ENST00000455383 TIMM8BQ9Y5J9 83 aaPredicted RBP12.97□□□□□ -0.33
MSH6-206ENST00000455383 MED6O75586 246 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 RPP30P78346 268 aaKnown RBP12.96□□□□□ -0.33
MSH6-206ENST00000455383 TTC32Q5I0X7 151 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 ZNF493Q6ZR52 646 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 ZNF503Q96F45 646 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 SHANK2-AS3Q9BTD1 123 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 Q9H3A6 140 aa12.96□□□□□ -0.33
MSH6-206ENST00000455383 A0A087X0K7 114 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 SYNGR2O43760 224 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 RPL7P18124 248 aaKnown RBP12.95□□□□□ -0.34
MSH6-206ENST00000455383 CXCL3P19876 107 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 PLP1P60201 277 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
MSH6-206ENST00000455383 FGL1Q08830 312 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 SPCS2Q15005 226 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 TMEM144Q7Z5S9 345 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 MCUBQ9NWR8 336 aa12.95□□□□□ -0.34
MSH6-206ENST00000455383 A0A1W2PPQ1 181 aa12.94□□□□□ -0.34
MSH6-206ENST00000455383 TMEM128Q5BJH2 165 aa12.94□□□□□ -0.34
MSH6-206ENST00000455383 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
MSH6-206ENST00000455383 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
MSH6-206ENST00000455383 SOSTQ9BQB4 213 aa12.94□□□□□ -0.34
MSH6-206ENST00000455383 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
MSH6-206ENST00000455383 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
MSH6-206ENST00000455383 WRBO00258 174 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 RHOBP62745 196 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 PSG3Q16557 428 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 CYP2G1PQ6ZSU1 146 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 ACOT7LQ6ZUV0 252 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
MSH6-206ENST00000455383 GNPNAT1Q96EK6 184 aaPredicted RBP12.93□□□□□ -0.34
MSH6-206ENST00000455383 TRAV26-1A0A087WT03 109 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 M6PRP20645 277 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 CDKN1BP46527 198 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 ESRGQ1W209 222 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
MSH6-206ENST00000455383 H3BNG1 76 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 H7BYZ3 331 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
MSH6-206ENST00000455383 MRPS12O15235 138 aaKnown RBP12.91□□□□□ -0.34
MSH6-206ENST00000455383 HYPMO75409 117 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 HTN1P15515 57 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 RAP2BP61225 183 aa12.91□□□□□ -0.34
MSH6-206ENST00000455383 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms