RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 C2CD4CQ8TF44 421 aa10.08□□□□□ -0.8
RFTN1-207ENST00000453536 SMIM8Q96KF7 97 aa10.08□□□□□ -0.8
RFTN1-207ENST00000453536 SLC25A39Q9BZJ4 359 aaPredicted RBP10.08□□□□□ -0.8
RFTN1-207ENST00000453536 LSM5Q9Y4Y9 91 aaKnown RBP10.08□□□□□ -0.8
RFTN1-207ENST00000453536 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
RFTN1-207ENST00000453536 IFNA21P01568 189 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 IL5P05113 134 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 OR5G3P0C626 314 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 BAP18Q8IXM2 172 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
RFTN1-207ENST00000453536 MFFQ9GZY8 342 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
RFTN1-207ENST00000453536 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 K7EPK0 472 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 ISLRO14498 428 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 FABP1P07148 127 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
RFTN1-207ENST00000453536 DLK1P80370 383 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 IFITM3Q01628 133 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 SPINK13Q1W4C9 94 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 MGST2Q99735 147 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
RFTN1-207ENST00000453536 SEPSECSQ9HD40 501 aaKnown RBP10.06□□□□□ -0.8
RFTN1-207ENST00000453536 PKHD1P08F94 4074 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 NACAE9PAV3 2078 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 CENPXA8MT69 81 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 SLC17A3O00476 420 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 MRPS12O15235 138 aaKnown RBP10.05□□□□□ -0.8
RFTN1-207ENST00000453536 CRXO43186 299 aaPredicted RBP10.05□□□□□ -0.8
RFTN1-207ENST00000453536 CST7O76096 145 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 ID1P41134 155 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 GALR1P47211 349 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
RFTN1-207ENST00000453536 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 C7orf50Q9BRJ6 194 aaKnown RBP10.05□□□□□ -0.8
RFTN1-207ENST00000453536 HRH4Q9H3N8 390 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
RFTN1-207ENST00000453536 TRAV5A0A0B4J249 113 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 IGSF23A1L1A6 192 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
RFTN1-207ENST00000453536 SIX6O95475 246 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 NUP62P37198 522 aaPredicted RBP10.04□□□□□ -0.8
RFTN1-207ENST00000453536 PSG9Q00887 426 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 TMEM41BQ5BJD5 291 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 FAM222AQ5U5X8 452 aa10.04□□□□□ -0.8
RFTN1-207ENST00000453536 HERC2O95714 4834 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
RFTN1-207ENST00000453536 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 PRAC2D3DTV9 90 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 AGPAT2O15120 278 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 TSC22D2O75157 780 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 HYPMO75409 117 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 EBLN2Q6P2I7 272 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
RFTN1-207ENST00000453536 TMEM37Q8WXS4 190 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 ARV1Q9H2C2 271 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 RPRMQ9NS64 109 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 PKD1P98161 4303 aa10.03□□□□□ -0.8
RFTN1-207ENST00000453536 PIGBOS1A0A0B4J2F0 54 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 C5orf51A6NDU8 294 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 A8MTW9 85 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 HTN3P15516 51 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 AZU1P20160 251 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 BCAP31P51572 246 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 PLP1P60201 277 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 S100A10P60903 97 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
RFTN1-207ENST00000453536 RAB32Q13637 225 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 FCN2Q15485 313 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 C12orf45Q8N5I9 185 aaPredicted RBP10.02□□□□□ -0.81
RFTN1-207ENST00000453536 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 OR10P1Q8NGE3 313 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 C1QTNF4Q9BXJ3 329 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
RFTN1-207ENST00000453536 YTHDF2Q9Y5A9 579 aaKnown RBP10.02□□□□□ -0.81
RFTN1-207ENST00000453536 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 CXCL3P19876 107 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 CAV2P51636 162 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 RAP2BP61225 183 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
RFTN1-207ENST00000453536 IL15RAQ13261 267 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 OPCMLQ14982 345 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 TEPPQ6URK8 271 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 NPVFQ9HCQ7 196 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 MGAT4CQ9UBM8 478 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 PFDN2Q9UHV9 154 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 KIAA1109Q2LD37 5005 aa10.01□□□□□ -0.81
RFTN1-207ENST00000453536 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms