RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 RNF222A6NCQ9 220 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 G3V3Q6 166 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 H3BRN7 92 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 OR5G3P0C626 314 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 RPL7P18124 248 aaKnown RBP6.54□□□□□ -1.36
COL28A1-205ENST00000453441 ORM2P19652 201 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 GALR1P47211 349 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 Q5BKY6 102 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 SIGLEC15Q6ZMC9 328 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 OR8I2Q8N0Y5 310 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 SHANK2-AS3Q9BTD1 123 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
COL28A1-205ENST00000453441 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 ARL6Q9H0F7 186 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 ARV1Q9H2C2 271 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 DNAJC4Q9NNZ3 241 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 AURKAIP1Q9NWT8 199 aaPredicted RBP6.54□□□□□ -1.36
COL28A1-205ENST00000453441 PXMP4Q9Y6I8 212 aa6.54□□□□□ -1.36
COL28A1-205ENST00000453441 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 IZUMO1RA6ND01 250 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF98A6NK75 572 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 A8MZ25 164 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 DNASE2O00115 360 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 ARPC5O15511 151 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 JTBO76095 146 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 APOHP02749 345 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 EDN2P20800 178 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 GATA2P23769 480 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 EIF5AP63241 154 aaKnown RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 DEFA6Q01524 100 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 C10orf113Q5VZT2 155 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 TMEM182Q6ZP80 229 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 GNPNAT1Q96EK6 184 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 ST6GAL2Q96JF0 529 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 PSMG3Q9BT73 122 aaPredicted RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 MRPL32Q9BYC8 188 aaKnown RBP6.53□□□□□ -1.36
COL28A1-205ENST00000453441 SMIM3Q9BZL3 60 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 NRN1Q9NPD7 142 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 SMAD5-AS1Q9Y6J3 95 aa6.53□□□□□ -1.36
COL28A1-205ENST00000453441 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 IGHV3-66A0A0C4DH42 116 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 MBP02144 154 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 C1QBP02746 253 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 CD81P60033 236 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 SERF2P84101 59 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 MIC13Q5XKP0 118 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 LINC00305Q7Z4B0 112 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 KCNRGQ8N5I3 272 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 STXBP6Q8NFX7 210 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 OR2G3Q8NGZ4 309 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 PRR25Q96S07 402 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 DOK5Q9P104 306 aa6.52□□□□□ -1.37
COL28A1-205ENST00000453441 A0A087X0K7 114 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 KANTRA0A1W2PQU2 76 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 OR11H12B2RN74 326 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 K7EIL1 84 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 K7EQG2 157 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 CXCL2P19875 107 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 C4BPBP20851 252 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 ID1P41134 155 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
COL28A1-205ENST00000453441 GUK1Q16774 197 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
COL28A1-205ENST00000453441 PATE2Q6UY27 113 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 BPIFA4PQ86YQ2 179 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 Q8N1Y9 231 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 TMEM37Q8WXS4 190 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 SCRT1Q9BWW7 348 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 SLC25A32Q9H2D1 315 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 SLC25A22Q9H936 323 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
COL28A1-205ENST00000453441 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 ISLRO14498 428 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 M6PRP20645 277 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 PSMB3P49720 205 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 TAS2R45P59539 299 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 RHOBP62745 196 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 FFAR4Q5NUL3 377 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 DCANP1Q8TF63 244 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 UHRF2Q96PU4 802 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 TMEM14CQ9P0S9 112 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 FUT9Q9Y231 359 aa6.5□□□□□ -1.37
COL28A1-205ENST00000453441 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 BCL2L11O43521 198 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 PFDN1O60925 122 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 ZNF253O75346 499 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 ATP6V0CP27449 155 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 ODF3L2Q3SX64 289 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 FAM78BQ5VT40 261 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 SPATA31B1PQ5VZV4 182 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms