RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 NSUN5P1Q3KNT7 163 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IQCF2Q8IXL9 164 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OR8I2Q8N0Y5 310 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SCRT1Q9BWW7 348 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SLC25A2Q9BXI2 301 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TMEM14CQ9P0S9 112 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IGHV7-4-1A0A0J9YVY3 117 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 RAB19A4D1S5 217 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ADARB2-AS1A8MUL3 147 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 A8MWP6 167 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SLURP1P55000 103 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TM4SF20Q53R12 229 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ELOVL1Q9BW60 279 aa9.57□□□□□ -0.88
HLA-DPA1-244ENST00000453337 NBEAP1P0C6P0 100 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 HIST1H1EP10412 219 aaKnown RBP9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 FHL3Q13643 280 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 HIST2H2BDQ6DRA6 164 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ZNF503Q96F45 646 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CITED1Q99966 193 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TMPRSS5Q9H3S3 457 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 MANBALQ9NQG1 85 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IGHV3-49A0A0A0MS15 119 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 M0QZ24 198 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 APOHP02749 345 aaPredicted RBP9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OR10J4P0C629 311 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 PYYP10082 97 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GALR1P47211 349 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 PEA15Q15121 130 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GUK1Q16774 197 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 FAM210AQ96ND0 272 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ZNF747Q9BV97 191 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 EIF5A2Q9GZV4 153 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ARL2-SNX15V9GYD0 113 aa9.55□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TMEM213A2RRL7 107 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 HELTA6NFD8 242 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 C2orf70A6NJV1 201 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ZNF785A8K8V0 405 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CHEK1O14757 476 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CD5P06127 495 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GP9P14770 177 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CBLN1P23435 193 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 MEOX2P50222 304 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 C12orf54Q6X4T0 127 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 FXYD5Q96DB9 178 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 VAX2Q9UIW0 290 aa9.54□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ATRQ13535 2644 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IGHV3OR16-13A0A075B7E8 117 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IGHV3-74A0A0B4J1X5 117 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IGHV3-66A0A0C4DH42 116 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 OVOL1O14753 267 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 MRPS12O15235 138 aaKnown RBP9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 PAGE4O60829 102 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 FOLR2P14207 255 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 HAGHQ16775 308 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CST9LP1Q5W188 147 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 UQCC3Q6UW78 93 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
HLA-DPA1-244ENST00000453337 NDUFS6O75380 124 aaKnown RBP9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PF4P02776 101 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 IGLC2P0DOY2 106 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 BCL2P10415 239 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PDE6HQ13956 83 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ZNF506Q5JVG8 444 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SIGLEC15Q6ZMC9 328 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SLC7A5P1Q8MH63 180 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 LYPD1Q8N2G4 141 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ZNF586Q9NXT0 402 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SMAD5-AS1Q9Y6J3 95 aa9.52□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TRBV19A0A075B6N1 114 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 A0A087X0K7 114 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 LOC102723971A0A1B0GUV8 181 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms