RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SLC25A32Q9H2D1 315 aa7.71□□□□□ -1.18
USP1-204ENST00000452143 HSPG2P98160 4391 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 MED6O75586 246 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 INSP01308 110 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 TSPOP30536 169 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 FAUP35544 74 aaKnown RBP7.7□□□□□ -1.18
USP1-204ENST00000452143 B2MP61769 119 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 RPP30P78346 268 aaKnown RBP7.7□□□□□ -1.18
USP1-204ENST00000452143 OR2F1Q13607 317 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 TMEM128Q5BJH2 165 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 AMTNQ6UX39 209 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 GSG1LQ6UXU4 331 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 LRTM2Q8N967 370 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 RAB2BQ8WUD1 216 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 BCL7BQ9BQE9 202 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 MRPS26Q9BYN8 205 aaKnown RBP7.7□□□□□ -1.18
USP1-204ENST00000452143 SLC25A22Q9H936 323 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 TMED3Q9Y3Q3 217 aa7.7□□□□□ -1.18
USP1-204ENST00000452143 ZNF98A6NK75 572 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 PRSS46E5RG02 174 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 DUSP14O95147 198 aaKnown RBP7.69□□□□□ -1.18
USP1-204ENST00000452143 IAPPP10997 89 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 BPIFCQ8NFQ6 507 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 DYNC2LI1Q8TCX1 351 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 C20orf173Q96LM9 149 aa7.69□□□□□ -1.18
USP1-204ENST00000452143 CNN1P51911 297 aaKnown RBP7.68□□□□□ -1.18
USP1-204ENST00000452143 AP3S2P59780 193 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 TMED4Q7Z7H5 227 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 OR11H7Q8NGC8 314 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 C17orf77Q96MU5 243 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 ATG101Q9BSB4 218 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 RSG1Q9BU20 258 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 TMEM147Q9BVK8 224 aa7.68□□□□□ -1.18
USP1-204ENST00000452143 PAIP2BQ9ULR5 123 aaKnown RBP7.68□□□□□ -1.18
USP1-204ENST00000452143 CRXO43186 299 aaPredicted RBP7.67□□□□□ -1.18
USP1-204ENST00000452143 SYNGR2O43760 224 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 ORM2P19652 201 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 VAMP1P23763 118 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 TMBIM6P55061 237 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 AKR1C1Q04828 323 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 SPINK13Q1W4C9 94 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 ACOT7LQ6ZUV0 252 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 DEDD2Q8WXF8 326 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 SOSTQ9BQB4 213 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 SLC25A21Q9BQT8 299 aaPredicted RBP7.67□□□□□ -1.18
USP1-204ENST00000452143 SLIRPQ9GZT3 109 aaKnown RBP7.67□□□□□ -1.18
USP1-204ENST00000452143 LRP1BQ9NZR2 4599 aa7.67□□□□□ -1.18
USP1-204ENST00000452143 FABP12A6NFH5 140 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 H3BRN7 92 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 BOLA2-SMG1P6H3BVE0 249 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 M0R2Z0 102 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 RPL7P18124 248 aaKnown RBP7.66□□□□□ -1.18
USP1-204ENST00000452143 ZNRF2Q8NHG8 242 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 TRIM63Q969Q1 353 aa7.66□□□□□ -1.18
USP1-204ENST00000452143 TRAV8-2A0A0B4J237 113 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 NBDYA0A0U1RRE5 68 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 PLAC8L1A1L4L8 177 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 ZNF705GA8MUZ8 300 aaPredicted RBP7.65□□□□□ -1.18
USP1-204ENST00000452143 WRBO00258 174 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 CDK2AP2O75956 126 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 ATP5G1P05496 136 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 GATA2P23769 480 aaPredicted RBP7.65□□□□□ -1.18
USP1-204ENST00000452143 TNFSF8P32971 234 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 ATP5G3P48201 142 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 RAP2BP61225 183 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 TMEM144Q7Z5S9 345 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 S100A7AQ86SG5 101 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 BAP18Q8IXM2 172 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 C6orf223Q8N319 242 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 TOMM5Q8N4H5 51 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 ZNF738Q8NE65 137 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 SHANK2-AS3Q9BTD1 123 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 SLC25A39Q9BZJ4 359 aaPredicted RBP7.65□□□□□ -1.18
USP1-204ENST00000452143 RNF24Q9Y225 148 aa7.65□□□□□ -1.18
USP1-204ENST00000452143 STRAPQ9Y3F4 350 aaKnown RBP7.65□□□□□ -1.18
USP1-204ENST00000452143 A0A087X0K7 114 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 C16orf90A8MZG2 172 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 F5H768 121 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 H3BP45 60 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 NOL3O60936 208 aaKnown RBP7.64□□□□□ -1.19
USP1-204ENST00000452143 SFT2D2O95562 160 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 CCL18P55774 89 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 TAS2R60P59551 318 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 UBE2MP61081 183 aaKnown RBP7.64□□□□□ -1.19
USP1-204ENST00000452143 SELENOTP62341 195 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 TNP2Q05952 138 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 FGL1Q08830 312 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 SPANXN5Q5MJ07 72 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 TMEM182Q6ZP80 229 aaPredicted RBP7.64□□□□□ -1.19
USP1-204ENST00000452143 CYP2G1PQ6ZSU1 146 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 RNF182Q8N6D2 247 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 MCFD2Q8NI22 146 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 C16orf74Q96GX8 76 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms