RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 CD7P09564 240 aa18■□□□□ 0.47
CPSF4-207ENST00000451876 TMUB2Q71RG4 321 aa18■□□□□ 0.47
CPSF4-207ENST00000451876 GATAD1Q8WUU5 269 aa18■□□□□ 0.47
CPSF4-207ENST00000451876 JTBO76095 146 aa17.99■□□□□ 0.47
CPSF4-207ENST00000451876 SEPSECSQ9HD40 501 aaKnown RBP17.99■□□□□ 0.47
CPSF4-207ENST00000451876 KANTRA0A1W2PQU2 76 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 S100A7P31151 101 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 DEFA6Q01524 100 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 WFDC3Q8IUB2 231 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 DCANP1Q8TF63 244 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 PSMG3Q9BT73 122 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-207ENST00000451876 SMAD5-AS1Q9Y6J3 95 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 TRAV5A0A0B4J249 113 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 CD81P60033 236 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 FAM78BQ5VT40 261 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 SPATA31B1PQ5VZV4 182 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 S100A7AQ86SG5 101 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 Q8N1Y9 231 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 C17orf77Q96MU5 243 aa17.98■□□□□ 0.47
CPSF4-207ENST00000451876 OR4C46A6NHA9 309 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 K7EIL1 84 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 PFDN1O60925 122 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 GTSCR1Q86UQ5 136 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 FAM24BQ8N5W8 94 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 NRN1Q9NPD7 142 aa17.97■□□□□ 0.47
CPSF4-207ENST00000451876 DNASE2O00115 360 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-207ENST00000451876 PAFAH1B2P68402 229 aa17.96■□□□□ 0.47
CPSF4-207ENST00000451876 C9orf62Q8N4C0 152 aa17.96■□□□□ 0.47
CPSF4-207ENST00000451876 OR2G3Q8NGZ4 309 aa17.96■□□□□ 0.47
CPSF4-207ENST00000451876 ZNF471Q9BX82 626 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-207ENST00000451876 WFDC10AQ9H1F0 79 aa17.96■□□□□ 0.47
CPSF4-207ENST00000451876 K7EQG2 157 aa17.95■□□□□ 0.46
CPSF4-207ENST00000451876 MRPS12O15235 138 aaKnown RBP17.95■□□□□ 0.46
CPSF4-207ENST00000451876 RAB2AP61019 212 aa17.95■□□□□ 0.46
CPSF4-207ENST00000451876 MIR17HGQ75NE6 70 aa17.95■□□□□ 0.46
CPSF4-207ENST00000451876 GNPNAT1Q96EK6 184 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-207ENST00000451876 GPR82Q96P67 336 aa17.95■□□□□ 0.46
CPSF4-207ENST00000451876 RPL7P18124 248 aaKnown RBP17.94■□□□□ 0.46
CPSF4-207ENST00000451876 GALR1P47211 349 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 NKX2-5P52952 324 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-207ENST00000451876 ODF3L2Q3SX64 289 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 C19orf73Q9NVV2 129 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 UBQLN2Q9UHD9 624 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 TRAV2A0A0B4J234 112 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 M6PRP20645 277 aa17.94■□□□□ 0.46
CPSF4-207ENST00000451876 EIF3GO75821 320 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPSF4-207ENST00000451876 SNRPCP09234 159 aaKnown RBP17.93■□□□□ 0.46
CPSF4-207ENST00000451876 SERF2P84101 59 aa17.93■□□□□ 0.46
CPSF4-207ENST00000451876 ACOT6Q3I5F7 207 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-207ENST00000451876 FUT9Q9Y231 359 aa17.93■□□□□ 0.46
CPSF4-207ENST00000451876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.92■□□□□ 0.46
CPSF4-207ENST00000451876 BPIFA4PQ86YQ2 179 aa17.92■□□□□ 0.46
CPSF4-207ENST00000451876 SLC25A2Q9BXI2 301 aa17.92■□□□□ 0.46
CPSF4-207ENST00000451876 MRPL32Q9BYC8 188 aaKnown RBP17.92■□□□□ 0.46
CPSF4-207ENST00000451876 RNF24Q9Y225 148 aa17.92■□□□□ 0.46
CPSF4-207ENST00000451876 SOCS3O14543 225 aa17.91■□□□□ 0.46
CPSF4-207ENST00000451876 SPP1P10451 314 aa17.91■□□□□ 0.46
CPSF4-207ENST00000451876 FAM167A-AS1Q96KT0 104 aa17.91■□□□□ 0.46
CPSF4-207ENST00000451876 MAP6D1Q9H9H5 199 aa17.91■□□□□ 0.46
CPSF4-207ENST00000451876 ATF4P18848 351 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-207ENST00000451876 OR10G4Q8NGN3 311 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 OR10G9Q8NGN4 311 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 OR10G7Q8NGN6 311 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 OR11H12B2RN74 326 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 ZNF688P0C7X2 276 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 PYYP10082 97 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 RHOBP62745 196 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 ZNF124Q15973 351 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 FAM122CQ6P4D5 195 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 RPP25LQ8N5L8 163 aaKnown RBP17.9■□□□□ 0.46
CPSF4-207ENST00000451876 DEFB125Q8N687 156 aa17.9■□□□□ 0.46
CPSF4-207ENST00000451876 PRKDCP78527 4128 aaKnown RBP17.89■□□□□ 0.45
CPSF4-207ENST00000451876 A0A087X0K7 114 aa17.89■□□□□ 0.45
CPSF4-207ENST00000451876 IGLC2P0DOY2 106 aa17.89■□□□□ 0.45
CPSF4-207ENST00000451876 STOML3Q8TAV4 291 aa17.89■□□□□ 0.45
CPSF4-207ENST00000451876 RPRMQ9NS64 109 aa17.89■□□□□ 0.45
CPSF4-207ENST00000451876 H3BQ15 152 aa17.88■□□□□ 0.45
CPSF4-207ENST00000451876 H3BTX0 84 aa17.88■□□□□ 0.45
CPSF4-207ENST00000451876 APRG1Q8IVJ8 170 aa17.88■□□□□ 0.45
CPSF4-207ENST00000451876 BAP18Q8IXM2 172 aa17.88■□□□□ 0.45
CPSF4-207ENST00000451876 MRAPQ8TCY5 172 aa17.88■□□□□ 0.45
CPSF4-207ENST00000451876 IGHV4-30-4P0DP06 118 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 TPT1P13693 172 aaKnown RBP17.87■□□□□ 0.45
CPSF4-207ENST00000451876 DEFB131AP59861 70 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 TMEM41BQ5BJD5 291 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 CITED4Q96RK1 184 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 FAM110AQ9BQ89 295 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 TMEM14CQ9P0S9 112 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 A0A1W2PPV4 95 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 HMGB3O15347 200 aaKnown RBP17.87■□□□□ 0.45
CPSF4-207ENST00000451876 MBP02144 154 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 MEOX2P50222 304 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 IGFL4Q6B9Z1 124 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 ZNF503Q96F45 646 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 HRH4Q9H3N8 390 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 PLA2G2EQ9NZK7 142 aa17.87■□□□□ 0.45
CPSF4-207ENST00000451876 CDC34P49427 236 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-207ENST00000451876 PSMG4Q5JS54 123 aa17.86■□□□□ 0.45
CPSF4-207ENST00000451876 SSX7Q7RTT5 188 aa17.86■□□□□ 0.45
CPSF4-207ENST00000451876 ZNF586Q9NXT0 402 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms