RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 METTL26Q96S19 204 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
SHMT2-203ENST00000449049 UFC1Q9Y3C8 167 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 CRYBB3P26998 211 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 RAB5CP51148 216 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 DPPA3Q6W0C5 159 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 UHRF2Q96PU4 802 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 RNF2Q99496 336 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 OR51M1Q9H341 326 aa10.72□□□□□ -0.69
SHMT2-203ENST00000449049 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHMT2-203ENST00000449049 RHOBP62745 196 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 FAM78BQ5VT40 261 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 LINC00305Q7Z4B0 112 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 MDFIQ99750 246 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 MRPL32Q9BYC8 188 aaKnown RBP10.71□□□□□ -0.69
SHMT2-203ENST00000449049 SLC25A39Q9BZJ4 359 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-203ENST00000449049 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.69
SHMT2-203ENST00000449049 U3KQE9 123 aa10.71□□□□□ -0.69
SHMT2-203ENST00000449049 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 H3BRN7 92 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 ZNF207O43670 478 aaKnown RBP10.7□□□□□ -0.7
SHMT2-203ENST00000449049 S100A8P05109 93 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 NPPCP23582 126 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 SRSF3P84103 164 aaKnown RBP10.7□□□□□ -0.7
SHMT2-203ENST00000449049 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 S100A7AQ86SG5 101 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 FUT9Q9Y231 359 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 FOLR2P14207 255 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 S100A7P31151 101 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 FHITP49789 147 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 RNF141Q8WVD5 230 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 PEMTQ9UBM1 199 aa10.7□□□□□ -0.7
SHMT2-203ENST00000449049 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 PF4P02776 101 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 S100A9P06702 114 aaKnown RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 C2CD4CQ8TF44 421 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 ACTR3CQ9C0K3 210 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 SLC25A22Q9H936 323 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 SETD2Q9BYW2 2564 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 OVOL1O14753 267 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 BUB3O43684 328 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 APOHP02749 345 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 IL34Q6ZMJ4 242 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 MIR17HGQ75NE6 70 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 FAM213BQ8TBF2 198 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 RAB24Q969Q5 203 aa10.69□□□□□ -0.7
SHMT2-203ENST00000449049 TECRQ9NZ01 308 aaKnown RBP10.69□□□□□ -0.7
SHMT2-203ENST00000449049 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
SHMT2-203ENST00000449049 COLCA2A8K830 154 aa10.68□□□□□ -0.7
SHMT2-203ENST00000449049 EDN2P20800 178 aa10.68□□□□□ -0.7
SHMT2-203ENST00000449049 TREM1Q9NP99 234 aa10.68□□□□□ -0.7
SHMT2-203ENST00000449049 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
SHMT2-203ENST00000449049 RAB5BP61020 215 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 C1orf194Q5T5A4 169 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 ZFP82Q8N141 532 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 SLC25A2Q9BXI2 301 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 TRAV5A0A0B4J249 113 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 A0A1W2PS18 150 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 M0QZ24 198 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 CHEK1O14757 476 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 CSN3P07498 182 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 STAG3L2P0CL84 134 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 STAG3L3P0CL85 134 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 CBLN1P23435 193 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
SHMT2-203ENST00000449049 LEMD1Q68G75 181 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 ADAMTSL5Q6ZMM2 481 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 NIT2Q9NQR4 276 aa10.67□□□□□ -0.7
SHMT2-203ENST00000449049 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 C5orf52A6NGY3 159 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 ZNF705EA8MWA4 302 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-203ENST00000449049 TAS2R45P59539 299 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 PEA15Q15121 130 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 KHDC3LQ587J8 217 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 MBD3L1Q8WWY6 194 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-203ENST00000449049 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 IGHV3-66A0A0C4DH42 116 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 BMI1P35226 326 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms