RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ZNF98A6NK75 572 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 H3BRN7 92 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 UBE2CO00762 179 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 AGPAT2O15120 278 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 HYPMO75409 117 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 S100A11P31949 105 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 RAB31Q13636 194 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 S100A7AQ86SG5 101 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 PPP1R1CQ8WVI7 109 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 ARL6Q9H0F7 186 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 OR5AC2Q9NZP5 309 aa10.73□□□□□ -0.69
USP39-206ENST00000448971 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
USP39-206ENST00000448971 ID1P41134 155 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 CAMLGP49069 296 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 EWSR1Q01844 656 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP39-206ENST00000448971 ACTL10Q5JWF8 245 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 Q6ZWC4 215 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 GPR82Q96P67 336 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 UHRF2Q96PU4 802 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 MGST2Q99735 147 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 SHANK2-AS3Q9BTD1 123 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 SLC25A39Q9BZJ4 359 aaPredicted RBP10.72□□□□□ -0.69
USP39-206ENST00000448971 SLC25A31Q9H0C2 315 aa10.72□□□□□ -0.69
USP39-206ENST00000448971 SPRY2O43597 315 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 COX7A2P2O60397 106 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 JTBO76095 146 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 ATF4P18848 351 aaPredicted RBP10.71□□□□□ -0.69
USP39-206ENST00000448971 PSMB3P49720 205 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 MEOX2P50222 304 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 PLP1P60201 277 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 PXDC1Q5TGL8 231 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 SAMD13Q5VXD3 122 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 OVOL2Q9BRP0 275 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
USP39-206ENST00000448971 H0YIZ8 118 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 FGF7P21781 194 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 FGL1Q08830 312 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 ATP6V1FQ16864 119 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 RGS21Q2M5E4 152 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 VWC2Q2TAL6 325 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
USP39-206ENST00000448971 OR5C1Q8NGR4 320 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 LINC00052Q96N35 136 aa10.7□□□□□ -0.7
USP39-206ENST00000448971 SEPSECSQ9HD40 501 aaKnown RBP10.7□□□□□ -0.7
USP39-206ENST00000448971 SOCS3O14543 225 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 MPC2O95563 127 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 GHRHP01286 108 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 RPL7P18124 248 aaKnown RBP10.69□□□□□ -0.7
USP39-206ENST00000448971 NHLH2Q02577 135 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 CLINT1Q14677 625 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 MIC13Q5XKP0 118 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 Q6ZRG5 221 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 MED28Q9H204 178 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 MBD2Q9UBB5 411 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
USP39-206ENST00000448971 ISLRO14498 428 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 SPP1P10451 314 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 B2MP61769 119 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 OPCMLQ14982 345 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
USP39-206ENST00000448971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 THAP6Q8TBB0 222 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 RNF183Q96D59 192 aa10.68□□□□□ -0.7
USP39-206ENST00000448971 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 MPDU1O75352 247 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 PATE2Q6UY27 113 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 PFDN5Q99471 154 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 NPCDR1Q9BY65 106 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 PXMP4Q9Y6I8 212 aa10.67□□□□□ -0.7
USP39-206ENST00000448971 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
USP39-206ENST00000448971 HLA-DRB4P13762 266 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 CXCL3P19876 107 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 C4BPBP20851 252 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
USP39-206ENST00000448971 DEFB1P60022 68 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
USP39-206ENST00000448971 FCN2Q15485 313 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 TMEM41BQ5BJD5 291 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 LRRC20Q8TCA0 184 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 RPRMQ9NS64 109 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 SLC39A9Q9NUM3 307 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 HLA-DRB4X5D2U9 266 aa10.66□□□□□ -0.7
USP39-206ENST00000448971 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 IGKV3-20P01619 116 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 RPL12P30050 165 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms