RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SCRT1Q9BWW7 348 aa10.41□□□□□ -0.74
GTF3C3-206ENST00000448539 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
GTF3C3-206ENST00000448539 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
GTF3C3-206ENST00000448539 SLC25A32Q9H2D1 315 aa10.41□□□□□ -0.74
GTF3C3-206ENST00000448539 KCNIP2Q9NS61 270 aa10.41□□□□□ -0.74
GTF3C3-206ENST00000448539 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 ATF4P18848 351 aaPredicted RBP10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 MEOX2P50222 304 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 APOC4P55056 127 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PRR20EP86478 221 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PRR20CP86479 221 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PRR20DP86480 221 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PRR20BP86481 221 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PRR20AP86496 221 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PATE2Q6UY27 113 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 LINC00305Q7Z4B0 112 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 OR2T35Q8NGX2 323 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 SCGB1C1Q8TD33 95 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PFDN5Q99471 154 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 SPATA25Q9BR10 227 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 RSG1Q9BU20 258 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 SLC39A9Q9NUM3 307 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 PXMP4Q9Y6I8 212 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 U3KQK5 164 aa10.4□□□□□ -0.74
GTF3C3-206ENST00000448539 RPL35AP18077 110 aaKnown RBP10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 ZNF124Q15973 351 aa10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 STHQ8IWL8 128 aa10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 INO80EQ8NBZ0 244 aaPredicted RBP10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
GTF3C3-206ENST00000448539 FXYD6-FXYD2A0A087WZ82 144 aa10.38□□□□□ -0.75
GTF3C3-206ENST00000448539 TMEM37Q8WXS4 190 aa10.38□□□□□ -0.75
GTF3C3-206ENST00000448539 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
GTF3C3-206ENST00000448539 KIR2DL5BA0A0G2JN68 375 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 KIR2DL5BA0A0G2JPC4 375 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 UBE2CO00762 179 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 ISLRO14498 428 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 PSMB3P49720 205 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 Q5BKY6 102 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 ACTL10Q5JWF8 245 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 BPIFA4PQ86YQ2 179 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 KIR2DL5AQ8N109 375 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 KIR2DL5BQ8NHK3 375 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 AQP10Q96PS8 301 aa10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 KMT2CQ8NEZ4 4911 aaKnown RBP10.37□□□□□ -0.75
GTF3C3-206ENST00000448539 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
GTF3C3-206ENST00000448539 ZNF266Q14584 549 aa10.36□□□□□ -0.75
GTF3C3-206ENST00000448539 PARD6GQ9BYG4 376 aaPredicted RBP10.36□□□□□ -0.75
GTF3C3-206ENST00000448539 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
GTF3C3-206ENST00000448539 SOCS3O14543 225 aa10.35□□□□□ -0.75
GTF3C3-206ENST00000448539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.35□□□□□ -0.75
GTF3C3-206ENST00000448539 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
GTF3C3-206ENST00000448539 A0A087X0K7 114 aa10.34□□□□□ -0.75
GTF3C3-206ENST00000448539 RETNQ9HD89 108 aa10.34□□□□□ -0.75
GTF3C3-206ENST00000448539 RPRMQ9NS64 109 aa10.34□□□□□ -0.75
GTF3C3-206ENST00000448539 TNFSF18Q9UNG2 199 aa10.34□□□□□ -0.75
GTF3C3-206ENST00000448539 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 CXCL2P19875 107 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 GCSAMLQ5JQS6 135 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 FAM78BQ5VT40 261 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 MORN5Q5VZ52 161 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 MORN3Q6PF18 240 aaPredicted RBP10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 Q6ZWC4 215 aa10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
GTF3C3-206ENST00000448539 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 CA1P00915 261 aaPredicted RBP10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 SPP1P10451 314 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 NUTF2P61970 127 aaKnown RBP10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 LCN15Q6UWW0 184 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 FOXI2Q6ZQN5 318 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
GTF3C3-206ENST00000448539 RNF222A6NCQ9 220 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 H3BMM0 161 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 ARPC5O15511 151 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 SPRY2O43597 315 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 SNRPCP09234 159 aaKnown RBP10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 HLA-DRB4P13762 266 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 GUK1Q16774 197 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 ACOT6Q3I5F7 207 aaPredicted RBP10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 SPATA31B1PQ5VZV4 182 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 IGFL4Q6B9Z1 124 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 ZNF738Q8NE65 137 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 C20orf173Q96LM9 149 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
GTF3C3-206ENST00000448539 WWC2-AS2Q96NR7 200 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms