RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 MEOX2P50222 304 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 VWC2Q2TAL6 325 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 TMEM41BQ5BJD5 291 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 ARV1Q9H2C2 271 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 WDR83OSQ9Y284 106 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 SACSQ9NZJ4 4579 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 RYR2Q92736 4967 aa13.66□□□□□ -0.22
HDAC4-203ENST00000445704 F6UB75 175 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 DEFB4AO15263 64 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-203ENST00000445704 S100A7P31151 101 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 H2BFSP57053 126 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 LRRC37A5PQ49AS3 106 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 FOXI2Q6ZQN5 318 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 NMES1Q9C002 83 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 C11orf68Q9H3H3 251 aaKnown RBP13.65□□□□□ -0.22
HDAC4-203ENST00000445704 UQCC1Q9NVA1 299 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 TENM2Q9NT68 2774 aa13.65□□□□□ -0.22
HDAC4-203ENST00000445704 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 LCE6AA0A183 80 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 UBE2L5PA0A1B0GUS4 154 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 H0YIZ8 118 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 IGKV3-20P01619 116 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 CAMLGP49069 296 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 IGFL4Q6B9Z1 124 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 STX12Q86Y82 276 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 Q8NAQ8 132 aa13.64□□□□□ -0.23
HDAC4-203ENST00000445704 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-203ENST00000445704 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
HDAC4-203ENST00000445704 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
HDAC4-203ENST00000445704 S100A11P31949 105 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 PXDC1Q5TGL8 231 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 MORN5Q5VZ52 161 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 TMEM37Q8WXS4 190 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 X6R8D5 127 aa13.63□□□□□ -0.23
HDAC4-203ENST00000445704 A0A0J9YX75 114 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 SSNA1O43805 119 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 FXYD7P58549 80 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 HBG1P69891 147 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 HBG2P69892 147 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 PRR20EP86478 221 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 PRR20CP86479 221 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 PRR20DP86480 221 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 PRR20BP86481 221 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 PRR20AP86496 221 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 NHLH2Q02577 135 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 FGL1Q08830 312 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 RNF182Q8N6D2 247 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 RPRMQ9NS64 109 aa13.62□□□□□ -0.23
HDAC4-203ENST00000445704 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
HDAC4-203ENST00000445704 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 NUTF2P61970 127 aaKnown RBP13.61□□□□□ -0.23
HDAC4-203ENST00000445704 BAXQ07812 192 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
HDAC4-203ENST00000445704 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 ZNF709Q8N972 641 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 CLUHP3Q96NS8 147 aa13.61□□□□□ -0.23
HDAC4-203ENST00000445704 A0A087X0K7 114 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 E5RGE8 158 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 RLN2P04090 185 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 CYCSP99999 105 aaKnown RBP13.6□□□□□ -0.23
HDAC4-203ENST00000445704 RAB31Q13636 194 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 OPCMLQ14982 345 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 ATP6V1FQ16864 119 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 EBLN2Q6P2I7 272 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 PPP1R1CQ8WVI7 109 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
HDAC4-203ENST00000445704 FGF7P21781 194 aa13.59□□□□□ -0.23
HDAC4-203ENST00000445704 NANOS2P60321 138 aaKnown RBP13.59□□□□□ -0.23
HDAC4-203ENST00000445704 C10orf113Q5VZT2 155 aa13.59□□□□□ -0.23
HDAC4-203ENST00000445704 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
HDAC4-203ENST00000445704 S100A7AQ86SG5 101 aa13.59□□□□□ -0.23
HDAC4-203ENST00000445704 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-203ENST00000445704 A8MTW9 85 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 SNRPCP09234 159 aaKnown RBP13.58□□□□□ -0.24
HDAC4-203ENST00000445704 MIFP14174 115 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 RPL29P47914 159 aaKnown RBP13.58□□□□□ -0.24
HDAC4-203ENST00000445704 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-203ENST00000445704 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 C11orf45Q8TAV5 145 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 CHAC2Q8WUX2 184 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 RNF126Q9BV68 326 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 SLC25A31Q9H0C2 315 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 SLC39A9Q9NUM3 307 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
HDAC4-203ENST00000445704 NUPR2A6NF83 97 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms