RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 LIME1Q9H400 295 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 COX8AP10176 69 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 RPUSD1Q9UJJ7 312 aaKnown RBP15.25■□□□□ 0.03
SHANK3-203ENST00000445220 CRPP02741 224 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 ZNF329Q86UD4 541 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 TRAV3A0A0B4J244 114 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 PLAURQ03405 335 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 LYPD1Q8N2G4 141 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 ZIC4Q8N9L1 334 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 SPANXDQ9BXN6 97 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 C10orf55Q5SWW7 151 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 PNRC2Q9NPJ4 139 aaKnown RBP15.24■□□□□ 0.03
SHANK3-203ENST00000445220 CCL19Q99731 98 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 DUSP14O95147 198 aaKnown RBP15.24■□□□□ 0.03
SHANK3-203ENST00000445220 DPH3P1Q9H4G8 78 aa15.24■□□□□ 0.03
SHANK3-203ENST00000445220 NPC2P61916 151 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 CENPVQ7Z7K6 275 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-203ENST00000445220 PHLDA1Q8WV24 401 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-203ENST00000445220 RALGAPA1Q6GYQ0 2036 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 GPR179Q6PRD1 2367 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 TRGV11A0A075B6L2 103 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 AZU1P20160 251 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 GATD1Q8NB37 220 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 SDK2Q58EX2 2172 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 A0A1W2PPM0 123 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 VCYO14598 125 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 PLA2G5P39877 138 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 BVES-AS1Q5T3Y7 98 aa15.23■□□□□ 0.03
SHANK3-203ENST00000445220 ITLN2Q8WWU7 325 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-203ENST00000445220 H3BMM0 161 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 PSPNO60542 156 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 LINC00158P58513 81 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 UBE2WQ96B02 151 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 TRAV40A0A0B4J280 105 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 RNASE6Q93091 150 aaKnown RBP15.22■□□□□ 0.03
SHANK3-203ENST00000445220 Q86TA4 180 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 ZNF492Q9P255 531 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 EFNA2O43921 213 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 CT83Q5H943 113 aa15.22■□□□□ 0.03
SHANK3-203ENST00000445220 FREM3P0C091 2139 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 SMKR1H3BMG3 65 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 TMEM167AQ8TBQ9 72 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 BDP1A6H8Y1 2624 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 IGHV3OR16-10A0A075B7F0 116 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 IFITM1P13164 125 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 MBNL3Q9NUK0 354 aaKnown RBP15.21■□□□□ 0.03
SHANK3-203ENST00000445220 CEP250Q9BV73 2442 aa15.21■□□□□ 0.03
SHANK3-203ENST00000445220 TRGV2A0A075B6R0 118 aa15.21■□□□□ 0.02
SHANK3-203ENST00000445220 LINC00473A8K010 186 aa15.21■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE2AQ6NT46 116 aa15.21■□□□□ 0.02
SHANK3-203ENST00000445220 LCNL1Q6ZST4 164 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 SRRM5B3KS81 715 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 CD59P13987 128 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 MYOD1P15172 320 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 LINC00479Q96M42 142 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 SCN5AQ14524 2016 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 MPDZO75970 2070 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 ARMS2P0C7Q2 107 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 IGHV3-11P01762 117 aa15.2■□□□□ 0.02
SHANK3-203ENST00000445220 PRB4P10163 310 aaPredicted RBP15.2■□□□□ 0.02
SHANK3-203ENST00000445220 C5orf63A6NC05 138 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 MALP21145 153 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 GGNQ86UU5 652 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 ANAPC10Q9UM13 185 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 ARHGEF17Q96PE2 2063 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-203ENST00000445220 PINLYPA6NC86 204 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 LY6DQ14210 128 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 ZSWIM8A7E2V4 1837 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 IGHV1-24A0A0C4DH33 117 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 KIR2DL5BA0A0G2JN68 375 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 KIR2DL5BA0A0G2JPC4 375 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 ZNF876PQ49A33 203 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 KIR2DL5AQ8N109 375 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 CSTL1Q9H114 145 aa15.19■□□□□ 0.02
SHANK3-203ENST00000445220 SIGLEC15Q6ZMC9 328 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 NEGR1Q7Z3B1 354 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 RASL10AQ92737 203 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 SPRR3Q9UBC9 169 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 ZNF726P1Q15940 193 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 LGALS9BQ3B8N2 356 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 LGALS9CQ6DKI2 356 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 DNAJC30Q96LL9 226 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 ZNF581Q9P0T4 197 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 V9GYV3 84 aa15.18■□□□□ 0.02
SHANK3-203ENST00000445220 CLPSP04118 112 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 SELLP14151 372 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 CDPF1Q6NVV7 123 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 E9PQ18 207 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 MYMXA0A1B0GTQ4 84 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 ADARB2-AS1A8MUL3 147 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 TIMM23O14925 209 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 INAFM2P0DMQ5 153 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 VDAC2P45880 294 aaPredicted RBP15.17■□□□□ 0.02
SHANK3-203ENST00000445220 Q8TAT8 98 aa15.17■□□□□ 0.02
SHANK3-203ENST00000445220 PAX4O43316 350 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 RPL15P61313 204 aaKnown RBP15.16■□□□□ 0.02
SHANK3-203ENST00000445220 Q6P435 159 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 CYYR1Q96J86 154 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 IGHV1-18A0A0C4DH31 117 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms