RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MFFQ9GZY8 342 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 TNFSF18Q9UNG2 199 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 K7EQG2 157 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 TAAR5O14804 337 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 C16orf92Q96LL3 132 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 RSG1Q9BU20 258 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 SLC25A32Q9H2D1 315 aa10.53□□□□□ -0.72
SSBP3-208ENST00000444533 SEPSECSQ9HD40 501 aaKnown RBP10.53□□□□□ -0.72
SSBP3-208ENST00000444533 ZNF688P0C7X2 276 aa10.52□□□□□ -0.73
SSBP3-208ENST00000444533 DEFB131AP59861 70 aa10.52□□□□□ -0.73
SSBP3-208ENST00000444533 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
SSBP3-208ENST00000444533 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
SSBP3-208ENST00000444533 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
SSBP3-208ENST00000444533 LOC102724200A0A096LPH7 203 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-208ENST00000444533 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-208ENST00000444533 PSMB3P49720 205 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 APOC4P55056 127 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-208ENST00000444533 ODF3L2Q3SX64 289 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 PSMG4Q5JS54 123 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 FAM78BQ5VT40 261 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 PATE2Q6UY27 113 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 STHQ8IWL8 128 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 TMEM37Q8WXS4 190 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 GNPNAT1Q96EK6 184 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-208ENST00000444533 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
SSBP3-208ENST00000444533 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 TIMM9Q9Y5J7 89 aa10.51□□□□□ -0.73
SSBP3-208ENST00000444533 A0A0D9SG52 128 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 RNF222A6NCQ9 220 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 HMSDA8MTL9 139 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 ISLRO14498 428 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 JTBO76095 146 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 TAS2R45P59539 299 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 HSD17B11Q8NBQ5 300 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
SSBP3-208ENST00000444533 A0A1W2PPV4 95 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 MBP02144 154 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 CXCL2P19875 107 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 RHOBP62745 196 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 ZNF345Q14585 488 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 GUK1Q16774 197 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 LCN15Q6UWW0 184 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 WFDC1Q9HC57 220 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 RPRMQ9NS64 109 aa10.49□□□□□ -0.73
SSBP3-208ENST00000444533 PFDN1O60925 122 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 M6PRP20645 277 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
SSBP3-208ENST00000444533 SERF2P84101 59 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 TCTE3Q8IZS6 198 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 ASCL2Q99929 193 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 ARPC5LQ9BPX5 153 aa10.48□□□□□ -0.73
SSBP3-208ENST00000444533 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-208ENST00000444533 A0A087X0K7 114 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 C4BPBP20851 252 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
SSBP3-208ENST00000444533 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 FAM24BQ8N5W8 94 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 HRH4Q9H3N8 390 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 FUT9Q9Y231 359 aa10.47□□□□□ -0.73
SSBP3-208ENST00000444533 KIR2DL5BA0A0G2JN68 375 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 KIR2DL5BA0A0G2JPC4 375 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.73
SSBP3-208ENST00000444533 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.73
SSBP3-208ENST00000444533 G3V3Q6 166 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 UBE2CO00762 179 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 OR7C2O60412 319 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.73
SSBP3-208ENST00000444533 RPL35AP18077 110 aaKnown RBP10.46□□□□□ -0.73
SSBP3-208ENST00000444533 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 GCSAMLQ5JQS6 135 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 ACTL10Q5JWF8 245 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 SPATA31B1PQ5VZV4 182 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
SSBP3-208ENST00000444533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 KIR2DL5AQ8N109 375 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 KCNRGQ8N5I3 272 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 OR10G4Q8NGN3 311 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 KIR2DL5BQ8NHK3 375 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 SPATA25Q9BR10 227 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 TMEM14CQ9P0S9 112 aa10.46□□□□□ -0.73
SSBP3-208ENST00000444533 TRAV5A0A0B4J249 113 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 HAGHQ16775 308 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms