RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
TREX1-202ENST00000444177 Q6ZNX1 250 aa10.26□□□□□ -0.77
TREX1-202ENST00000444177 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
TREX1-202ENST00000444177 SLC45A2Q9UMX9 530 aa10.26□□□□□ -0.77
TREX1-202ENST00000444177 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
TREX1-202ENST00000444177 MPDU1O75352 247 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 LINC00869P0C866 280 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 RPL12P30050 165 aaKnown RBP10.25□□□□□ -0.77
TREX1-202ENST00000444177 S100A7P31151 101 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 NHLH2Q02577 135 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
TREX1-202ENST00000444177 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 GATAD1Q8WUU5 269 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 CHAC2Q8WUX2 184 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 SLC25A32Q9H2D1 315 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 WDR83OSQ9Y284 106 aa10.25□□□□□ -0.77
TREX1-202ENST00000444177 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 ZNF98A6NK75 572 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 SPP1P10451 314 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 GALR1P47211 349 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 PLP1P60201 277 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 RAB31Q13636 194 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 PXDC1Q5TGL8 231 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
TREX1-202ENST00000444177 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 LINC00476Q8WZB0 136 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 LINC00052Q96N35 136 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 SCRT1Q9BWW7 348 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
TREX1-202ENST00000444177 HIGD1AQ9Y241 93 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 HSPB11Q9Y547 144 aa10.24□□□□□ -0.77
TREX1-202ENST00000444177 H3BRN7 92 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 OR5G3P0C626 314 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 C4BPBP20851 252 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 ID1P41134 155 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 PSMB3P49720 205 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 S100A7AQ86SG5 101 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 OR2T35Q8NGX2 323 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 RARRES2Q99969 163 aa10.23□□□□□ -0.77
TREX1-202ENST00000444177 SOCS3O14543 225 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 AGPAT2O15120 278 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 HYPMO75409 117 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 LY6G6CO95867 125 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 MEOX2P50222 304 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 C16orf92Q96LL3 132 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 UHRF2Q96PU4 802 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 MGST2Q99735 147 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 ATP5SQ99766 215 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
TREX1-202ENST00000444177 ARL6Q9H0F7 186 aa10.22□□□□□ -0.77
TREX1-202ENST00000444177 UBE2L5PA0A1B0GUS4 154 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 HLA-DRB4P13762 266 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 CAMLGP49069 296 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 DEFB1P60022 68 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 TMEM41BQ5BJD5 291 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 SAMD13Q5VXD3 122 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 GPR82Q96P67 336 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 RSG1Q9BU20 258 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 PARD6GQ9BYG4 376 aaPredicted RBP10.21□□□□□ -0.77
TREX1-202ENST00000444177 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 RNF24Q9Y225 148 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
TREX1-202ENST00000444177 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.77
TREX1-202ENST00000444177 AGRNO00468 2067 aa10.21□□□□□ -0.78
TREX1-202ENST00000444177 G3V3Q6 166 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 H3BMM0 161 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 ISLRO14498 428 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 IGKV3-20P01619 116 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
TREX1-202ENST00000444177 RPL29P47914 159 aaKnown RBP10.2□□□□□ -0.78
TREX1-202ENST00000444177 PRR20EP86478 221 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 PRR20CP86479 221 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 PRR20DP86480 221 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 PRR20BP86481 221 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 PRR20AP86496 221 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 Q5BKY6 102 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 GDF5OSQ5U4N7 250 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 INO80EQ8NBZ0 244 aaPredicted RBP10.2□□□□□ -0.78
TREX1-202ENST00000444177 PHLDA1Q8WV24 401 aaPredicted RBP10.2□□□□□ -0.78
TREX1-202ENST00000444177 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 KCNIP2Q9NS61 270 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 TNFSF18Q9UNG2 199 aa10.2□□□□□ -0.78
TREX1-202ENST00000444177 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
TREX1-202ENST00000444177 COX7A2P2O60397 106 aa10.19□□□□□ -0.78
TREX1-202ENST00000444177 RPL7P18124 248 aaKnown RBP10.19□□□□□ -0.78
TREX1-202ENST00000444177 FGF7P21781 194 aa10.19□□□□□ -0.78
TREX1-202ENST00000444177 NUTF2P61970 127 aaKnown RBP10.19□□□□□ -0.78
TREX1-202ENST00000444177 CLINT1Q14677 625 aa10.19□□□□□ -0.78
TREX1-202ENST00000444177 OPCMLQ14982 345 aa10.19□□□□□ -0.78
TREX1-202ENST00000444177 FOXI2Q6ZQN5 318 aa10.19□□□□□ -0.78
TREX1-202ENST00000444177 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
TREX1-202ENST00000444177 SAV1Q9H4B6 383 aaPredicted RBP10.19□□□□□ -0.78
TREX1-202ENST00000444177 F6UB75 175 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 DEFB4AO15263 64 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 ZNF266Q14584 549 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms