RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
ATPAF2-201ENST00000444058 C11orf1Q9H5F2 150 aa13.65□□□□□ -0.22
ATPAF2-201ENST00000444058 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
ATPAF2-201ENST00000444058 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
ATPAF2-201ENST00000444058 DEFB4AO15263 64 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 EBLN2Q6P2I7 272 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF546Q86UE3 836 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 SCRT1Q9BWW7 348 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
ATPAF2-201ENST00000444058 OR5G3P0C626 314 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 RBMY1A1P0DJD3 496 aaKnown RBP13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 RBMY1CP0DJD4 496 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 CAV2P51636 162 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 NANOS2P60321 138 aaKnown RBP13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 RBMY1FQ15415 496 aaKnown RBP13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 ENKURQ8TC29 256 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 DOK5Q9P104 306 aa13.63□□□□□ -0.23
ATPAF2-201ENST00000444058 A0A0J9YX75 114 aa13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 GOSR2O14653 212 aa13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 AGPAT2O15120 278 aa13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 SLC38A11Q08AI6 406 aa13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 NEU1Q99519 415 aa13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 LYRM2Q9NU23 88 aaPredicted RBP13.62□□□□□ -0.23
ATPAF2-201ENST00000444058 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 BCAP31P51572 246 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 TCTAP57738 103 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 DEFB1P60022 68 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 RAB31Q13636 194 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF709Q8N972 641 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 ARL6Q9H0F7 186 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 ARV1Q9H2C2 271 aa13.61□□□□□ -0.23
ATPAF2-201ENST00000444058 ALMS1Q8TCU4 4167 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 A0A087X0K7 114 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 SMIM9A6NGZ8 99 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 A8MTW9 85 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF705DP0CH99 300 aaPredicted RBP13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 ZNF705BP0CI00 300 aaPredicted RBP13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 SULT1A1P50225 295 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 PSG9Q00887 426 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 IFITM3Q01628 133 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 PATE2Q6UY27 113 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 C20orf173Q96LM9 149 aa13.6□□□□□ -0.23
ATPAF2-201ENST00000444058 ELOA3CA0A087WX78 387 aaPredicted RBP13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 FAM24AA6NFZ4 105 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 F6UB75 175 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 PRAF2O60831 178 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 IGKV3-20P01619 116 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 S100A11P31949 105 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 RAB32Q13637 225 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 MGST2Q99735 147 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 HYDINQ4G0P3 5121 aa13.59□□□□□ -0.23
ATPAF2-201ENST00000444058 CST7O76096 145 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 CAMLGP49069 296 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 S100A10P60903 97 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 HBG1P69891 147 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 HBG2P69892 147 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 LINC00305Q7Z4B0 112 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 STX12Q86Y82 276 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 TMEM252Q8N6L7 170 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 C2CD4CQ8TF44 421 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 WDR83OSQ9Y284 106 aa13.58□□□□□ -0.24
ATPAF2-201ENST00000444058 MRPS12O15235 138 aaKnown RBP13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 DUSP14O95147 198 aaKnown RBP13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 HLA-DMBP28068 263 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 FGL1Q08830 312 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 Q6ZRG5 221 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 CHAC2Q8WUX2 184 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 SLC35B3Q9H1N7 401 aa13.57□□□□□ -0.24
ATPAF2-201ENST00000444058 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 INMT-MINDY4F8WBC2 141 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 LY6G6CO95867 125 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 CXCL2P19875 107 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 CXCL3P19876 107 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 DEFA1P59665 94 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 DEFA3P59666 94 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 PRR20EP86478 221 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 PRR20CP86479 221 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 PRR20DP86480 221 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 PRR20BP86481 221 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 PRR20AP86496 221 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 ATP6V1FQ16864 119 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 AMTNQ6UX39 209 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 MARVELD1Q9BSK0 173 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 NMES1Q9C002 83 aa13.56□□□□□ -0.24
ATPAF2-201ENST00000444058 IGSF23A1L1A6 192 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms