RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SLC25A32Q9H2D1 315 aa9.16□□□□□ -0.94
USP1-203ENST00000442679 DNAJC4Q9NNZ3 241 aa9.16□□□□□ -0.94
USP1-203ENST00000442679 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
USP1-203ENST00000442679 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
USP1-203ENST00000442679 FXYD6-FXYD2A0A087WZ82 144 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 ZNF688P0C7X2 276 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 DEFB131AP59861 70 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 B2MP61769 119 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 ZNF124Q15973 351 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 HAGHQ16775 308 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 LINC00322Q6ZN03 302 aaPredicted RBP9.15□□□□□ -0.94
USP1-203ENST00000442679 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 INO80EQ8NBZ0 244 aaPredicted RBP9.15□□□□□ -0.94
USP1-203ENST00000442679 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 TMEM37Q8WXS4 190 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 AQP10Q96PS8 301 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 WFDC1Q9HC57 220 aa9.15□□□□□ -0.94
USP1-203ENST00000442679 LOC102724200A0A096LPH7 203 aaPredicted RBP9.14□□□□□ -0.95
USP1-203ENST00000442679 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
USP1-203ENST00000442679 SNRPD3P62318 126 aaKnown RBP9.14□□□□□ -0.95
USP1-203ENST00000442679 Q6ZNX1 250 aa9.14□□□□□ -0.95
USP1-203ENST00000442679 PFDN5Q99471 154 aa9.14□□□□□ -0.95
USP1-203ENST00000442679 SEPSECSQ9HD40 501 aaKnown RBP9.14□□□□□ -0.95
USP1-203ENST00000442679 RNF24Q9Y225 148 aa9.14□□□□□ -0.95
USP1-203ENST00000442679 G3V3Q6 166 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 SMLR1H3BR10 107 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 RPL7P18124 248 aaKnown RBP9.13□□□□□ -0.95
USP1-203ENST00000442679 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
USP1-203ENST00000442679 ID1P41134 155 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 PSMG4Q5JS54 123 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 KCNIP2Q9NS61 270 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 TNFSF18Q9UNG2 199 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 COL7A1Q02388 2944 aa9.13□□□□□ -0.95
USP1-203ENST00000442679 HUWE1Q7Z6Z7 4374 aaKnown RBP9.13□□□□□ -0.95
USP1-203ENST00000442679 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
USP1-203ENST00000442679 MEOX2P50222 304 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 GATAD1Q8WUU5 269 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 C16orf92Q96LL3 132 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 PARD6GQ9BYG4 376 aaPredicted RBP9.12□□□□□ -0.95
USP1-203ENST00000442679 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
USP1-203ENST00000442679 TRAV5A0A0B4J249 113 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 RNF222A6NCQ9 220 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 ISLRO14498 428 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 SOCS3O14543 225 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 PSMB3P49720 205 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 TM2D3Q9BRN9 247 aa9.11□□□□□ -0.95
USP1-203ENST00000442679 KNCNA6PVL3 124 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 MRPS12O15235 138 aaKnown RBP9.1□□□□□ -0.95
USP1-203ENST00000442679 ARPC5O15511 151 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 APOC4P55056 127 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 ZNF266Q14584 549 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 ACTL10Q5JWF8 245 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 FFAR4Q5NUL3 377 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 FAM78BQ5VT40 261 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 STHQ8IWL8 128 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 LRRC20Q8TCA0 184 aa9.1□□□□□ -0.95
USP1-203ENST00000442679 A0A087X0K7 114 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 KIR2DL5BA0A0G2JN68 375 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 KIR2DL5BA0A0G2JPC4 375 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 SNRPCP09234 159 aaKnown RBP9.09□□□□□ -0.95
USP1-203ENST00000442679 SPATA31B1PQ5VZV4 182 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 KIR2DL5AQ8N109 375 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 KIR2DL5BQ8NHK3 375 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 SPATA25Q9BR10 227 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 MFFQ9GZY8 342 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 TIMM9Q9Y5J7 89 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 U3KQK5 164 aa9.09□□□□□ -0.95
USP1-203ENST00000442679 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 BORCS7-ASMTA0A0B4J1R7 106 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 UBE2CO00762 179 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 RPL7L1Q6DKI1 246 aaKnown RBP9.08□□□□□ -0.96
USP1-203ENST00000442679 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 RCHY1Q96PM5 261 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 CSTL1Q9H114 145 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 RPRMQ9NS64 109 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
USP1-203ENST00000442679 HMSDA8MTL9 139 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 H3BQ15 152 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 H3BTX0 84 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 TAAR5O14804 337 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 IGLC2P0DOY2 106 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 DEFB1P60022 68 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 ACOT6Q3I5F7 207 aaPredicted RBP9.07□□□□□ -0.96
USP1-203ENST00000442679 TRPT1Q86TN4 253 aaKnown RBP9.07□□□□□ -0.96
USP1-203ENST00000442679 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
USP1-203ENST00000442679 OR11H4Q8NGC9 324 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms