RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
CSNK1E-210ENST00000442216 SLC25A22Q9H936 323 aa11.11□□□□□ -0.63
CSNK1E-210ENST00000442216 DOK5Q9P104 306 aa11.11□□□□□ -0.63
CSNK1E-210ENST00000442216 DNAH9Q9NYC9 4486 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 PSMB3P49720 205 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 ZNF124Q15973 351 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 MIC13Q5XKP0 118 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 LEMD1Q68G75 181 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 Q6ZWC4 215 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 WWC2-AS2Q96NR7 200 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 PFDN5Q99471 154 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 DNAJC4Q9NNZ3 241 aa11.1□□□□□ -0.63
CSNK1E-210ENST00000442216 ISLRO14498 428 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 SOCS3O14543 225 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 COX7A2P2O60397 106 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 B2MP61769 119 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 PSMG4Q5JS54 123 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 ATP5SQ99766 215 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 SLC39A9Q9NUM3 307 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 TP53TG1Q9Y2A0 90 aa11.09□□□□□ -0.63
CSNK1E-210ENST00000442216 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 CLINT1Q14677 625 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 STHQ8IWL8 128 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 GATAD1Q8WUU5 269 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 RSG1Q9BU20 258 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 WDR61Q9GZS3 305 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
CSNK1E-210ENST00000442216 A0A087X0K7 114 aa11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 ATF4P18848 351 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-210ENST00000442216 C17orf112F2Z3M2 114 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 SPP1P10451 314 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 TMEM41BQ5BJD5 291 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
CSNK1E-210ENST00000442216 IFNA5P01569 189 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 CXCL2P19875 107 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 ACTL10Q5JWF8 245 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 RNF183Q96D59 192 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
CSNK1E-210ENST00000442216 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 SPRY2O43597 315 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 LINC00052Q96N35 136 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 CLUHP3Q96NS8 147 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 RETNQ9HD89 108 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
CSNK1E-210ENST00000442216 TENM3Q9P273 2699 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 H3BMM0 161 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 DEFB135Q30KP9 77 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 Q5BKY6 102 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 MORN5Q5VZ52 161 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 OR2T35Q8NGX2 323 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 SMIM3Q9BZL3 60 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 HRH4Q9H3N8 390 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
CSNK1E-210ENST00000442216 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-210ENST00000442216 ZNF266Q14584 549 aa11.02□□□□□ -0.65
CSNK1E-210ENST00000442216 GUK1Q16774 197 aa11.02□□□□□ -0.65
CSNK1E-210ENST00000442216 INO80EQ8NBZ0 244 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-210ENST00000442216 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
CSNK1E-210ENST00000442216 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 FAM78BQ5VT40 261 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 EBLN2Q6P2I7 272 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 C1QTNF4Q9BXJ3 329 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 MRPL32Q9BYC8 188 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 WFDC1Q9HC57 220 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 TIMM9Q9Y5J7 89 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 NBEAL2Q6ZNJ1 2754 aa11.01□□□□□ -0.65
CSNK1E-210ENST00000442216 A0A0J9YX75 114 aa11□□□□□ -0.65
CSNK1E-210ENST00000442216 ZNF253O75346 499 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms