RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ID3Q02535 119 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 ZNF266Q14584 549 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 DTD1Q8TEA8 209 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 PINX1Q96BK5 328 aaKnown RBP7.12□□□□□ -1.27
SYN3-204ENST00000441821 SMIM8Q96KF7 97 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 ARPC5LQ9BPX5 153 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 ARL6Q9H0F7 186 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 TMEM231Q9H6L2 316 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 LYRM2Q9NU23 88 aaPredicted RBP7.12□□□□□ -1.27
SYN3-204ENST00000441821 PSENENQ9NZ42 101 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 PAIP2BQ9ULR5 123 aaKnown RBP7.12□□□□□ -1.27
SYN3-204ENST00000441821 RCL1Q9Y2P8 373 aaKnown RBP7.12□□□□□ -1.27
SYN3-204ENST00000441821 U3KQ87 197 aa7.12□□□□□ -1.27
SYN3-204ENST00000441821 SMLR1H3BR10 107 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 CORTO00230 105 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 GNG7O60262 68 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 MT-CO2P00403 227 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 ZNF688P0C7X2 276 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 HTR2BP41595 481 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 FAM3BP58499 235 aaPredicted RBP7.11□□□□□ -1.27
SYN3-204ENST00000441821 POLR2GP62487 172 aaKnown RBP eCLIP7.11□□□□□ -1.27
SYN3-204ENST00000441821 IL15RAQ13261 267 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 OR10P1Q8NGE3 313 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 AQP10Q96PS8 301 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 C1QTNF4Q9BXJ3 329 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 RBKSQ9H477 322 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 TNFSF18Q9UNG2 199 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 AGRNO00468 2067 aa7.11□□□□□ -1.27
SYN3-204ENST00000441821 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 A0A1W2PS18 150 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 TMEM189A5PLL7 270 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 IFNA7P01567 189 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 IFNA5P01569 189 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 IGHV3-48P01763 117 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 P0C879 139 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
SYN3-204ENST00000441821 NPPCP23582 126 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 SULT1A1P50225 295 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 NUTF2P61970 127 aaKnown RBP7.1□□□□□ -1.27
SYN3-204ENST00000441821 PRCDQ00LT1 54 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 ATP6V1FQ16864 119 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 AARDQ4LEZ3 155 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 SPANXN5Q5MJ07 72 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 ZNF600Q6ZNG1 722 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 KCNRGQ8N5I3 272 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 STXBP6Q8NFX7 210 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 OR1S2Q8NGQ3 325 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 SCGB1C1Q8TD33 95 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 NEU1Q99519 415 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 MAGT1Q9H0U3 335 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
SYN3-204ENST00000441821 NACAE9PAV3 2078 aa7.1□□□□□ -1.27
SYN3-204ENST00000441821 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
SYN3-204ENST00000441821 A0A0G2JRQ6 117 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 RPS10-NUDT3A0A1W2PQS6 291 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 SMIM9A6NGZ8 99 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 BCL2L11O43521 198 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 NXPH3O95157 252 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 NPBWR1P48145 328 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 RAB14P61106 215 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 RAB31Q13636 194 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 OPCMLQ14982 345 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 ZNF705AQ6ZN79 300 aaPredicted RBP7.09□□□□□ -1.27
SYN3-204ENST00000441821 TMUB2Q71RG4 321 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 C6orf223Q8N319 242 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 C9orf62Q8N4C0 152 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 ZNF114Q8NC26 417 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 SLC24A4Q8NFF2 622 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 KCNIP2Q9NS61 270 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 OR5AC2Q9NZP5 309 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 DKK2Q9UBU2 259 aa7.09□□□□□ -1.27
SYN3-204ENST00000441821 NBDYA0A0U1RRE5 68 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 TEX48A0A1B0GUV7 120 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
SYN3-204ENST00000441821 INS-IGF2F8WCM5 200 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
SYN3-204ENST00000441821 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
SYN3-204ENST00000441821 IAPPP10997 89 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 CRYBB3P26998 211 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 EMP1P54849 157 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 CD300CQ08708 224 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 SPATA12Q7Z6I5 190 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 TMEM252Q8N6L7 170 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
SYN3-204ENST00000441821 NIPSNAP3BQ9BS92 247 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 GGACTQ9BVM4 153 aa7.08□□□□□ -1.28
SYN3-204ENST00000441821 ZNF471Q9BX82 626 aaPredicted RBP7.08□□□□□ -1.28
SYN3-204ENST00000441821 EPM2AB3EWF7 344 aa7.07□□□□□ -1.28
SYN3-204ENST00000441821 C17orf112F2Z3M2 114 aa7.07□□□□□ -1.28
SYN3-204ENST00000441821 TMEM50AO95807 157 aa7.07□□□□□ -1.28
SYN3-204ENST00000441821 FABP1P07148 127 aa7.07□□□□□ -1.28
SYN3-204ENST00000441821 NKX2-5P52952 324 aaPredicted RBP7.07□□□□□ -1.28
SYN3-204ENST00000441821 IZUMO4Q1ZYL8 232 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms