RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 OR1L4Q8NGR5 311 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 PFDN5Q99471 154 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 STAB2Q8WWQ8 2551 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 C17orf112F2Z3M2 114 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 SOCS3O14543 225 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 COX7A2P2O60397 106 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 IFNA5P01569 189 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 GALR1P47211 349 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 RPL29P47914 159 aaKnown RBP13.29□□□□□ -0.28
CPSF4-205ENST00000440514 SNRPD3P62318 126 aaKnown RBP13.29□□□□□ -0.28
CPSF4-205ENST00000440514 PRR20EP86478 221 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 PRR20CP86479 221 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 PRR20DP86480 221 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 PRR20BP86481 221 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 PRR20AP86496 221 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 INO80EQ8NBZ0 244 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-205ENST00000440514 C17orf77Q96MU5 243 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 HSPB11Q9Y547 144 aa13.29□□□□□ -0.28
CPSF4-205ENST00000440514 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 WWC2-AS2Q96NR7 200 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 RSG1Q9BU20 258 aa13.28□□□□□ -0.28
CPSF4-205ENST00000440514 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.29
CPSF4-205ENST00000440514 ID1P41134 155 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 DEFB1P60022 68 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 B2MP61769 119 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 LINC00305Q7Z4B0 112 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 STHQ8IWL8 128 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 SCGB1C1Q8TD33 95 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 TMEM37Q8WXS4 190 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 ATP5SQ99766 215 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 NPCDR1Q9BY65 106 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 PXMP4Q9Y6I8 212 aa13.27□□□□□ -0.29
CPSF4-205ENST00000440514 PSMB3P49720 205 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 ZNF266Q14584 549 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 C10orf113Q5VZT2 155 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
CPSF4-205ENST00000440514 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 DNAJC4Q9NNZ3 241 aa13.26□□□□□ -0.29
CPSF4-205ENST00000440514 ATF4P18848 351 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-205ENST00000440514 Q5BKY6 102 aa13.25□□□□□ -0.29
CPSF4-205ENST00000440514 OR2T35Q8NGX2 323 aa13.25□□□□□ -0.29
CPSF4-205ENST00000440514 GATAD1Q8WUU5 269 aa13.25□□□□□ -0.29
CPSF4-205ENST00000440514 C16orf92Q96LL3 132 aa13.25□□□□□ -0.29
CPSF4-205ENST00000440514 PARD6GQ9BYG4 376 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-205ENST00000440514 WDR61Q9GZS3 305 aaKnown RBP13.25□□□□□ -0.29
CPSF4-205ENST00000440514 AGRNO00468 2067 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 UBE2CO00762 179 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 ISLRO14498 428 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 CA1P00915 261 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-205ENST00000440514 Q6ZWC4 215 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 C20orf173Q96LM9 149 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 AQP10Q96PS8 301 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
CPSF4-205ENST00000440514 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
CPSF4-205ENST00000440514 C4BPBP20851 252 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 GCSAMLQ5JQS6 135 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 EDA2RQ9HAV5 297 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
CPSF4-205ENST00000440514 A0A087X0K7 114 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 TRAV8-2A0A0B4J237 113 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 SPRY2O43597 315 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 SNRPCP09234 159 aaKnown RBP13.22□□□□□ -0.29
CPSF4-205ENST00000440514 BPIFA4PQ86YQ2 179 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 RNF182Q8N6D2 247 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 RNF183Q96D59 192 aa13.22□□□□□ -0.29
CPSF4-205ENST00000440514 NBEAL2Q6ZNJ1 2754 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 F6UB75 175 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-205ENST00000440514 CLEC5AQ9NY25 188 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
CPSF4-205ENST00000440514 H3BMM0 161 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 H3BTX0 84 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 TAAR5O14804 337 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 GIG44P09565 113 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-205ENST00000440514 CXCL2P19875 107 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 TMEM41BQ5BJD5 291 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 FOXI2Q6ZQN5 318 aa13.2□□□□□ -0.3
CPSF4-205ENST00000440514 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 BORCS7-ASMTA0A0B4J1R7 106 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 IGKV3-20P01619 116 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 SPP1P10451 314 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 GUK1Q16774 197 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms