RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SSNA1O43805 119 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 HLA-DRB4P13762 266 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 H2BFSP57053 126 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 CYCSP99999 105 aaKnown RBP17.25■□□□□ 0.35
VARS-217ENST00000440048 VWC2Q2TAL6 325 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 TMEM41BQ5BJD5 291 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 PXDC1Q5TGL8 231 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 SAMD13Q5VXD3 122 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 WDR83OSQ9Y284 106 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 HLA-DRB4X5D2U9 266 aa17.25■□□□□ 0.35
VARS-217ENST00000440048 LYSTQ99698 3801 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 RLN2P04090 185 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 CAMLGP49069 296 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 HBG1P69891 147 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 HBG2P69892 147 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 LRRC37A5PQ49AS3 106 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 GDF5OSQ5U4N7 250 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 S100A7AQ86SG5 101 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 C16orf92Q96LL3 132 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 ARV1Q9H2C2 271 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 OR5AC2Q9NZP5 309 aa17.24■□□□□ 0.35
VARS-217ENST00000440048 H0YIZ8 118 aa17.23■□□□□ 0.35
VARS-217ENST00000440048 RPL7P18124 248 aaKnown RBP17.23■□□□□ 0.35
VARS-217ENST00000440048 RAB31Q13636 194 aa17.23■□□□□ 0.35
VARS-217ENST00000440048 C20orf173Q96LM9 149 aa17.23■□□□□ 0.35
VARS-217ENST00000440048 SAV1Q9H4B6 383 aaPredicted RBP17.23■□□□□ 0.35
VARS-217ENST00000440048 UBE2L5PA0A1B0GUS4 154 aa17.22■□□□□ 0.35
VARS-217ENST00000440048 E5RGE8 158 aa17.22■□□□□ 0.35
VARS-217ENST00000440048 ATP6V1FQ16864 119 aa17.22■□□□□ 0.35
VARS-217ENST00000440048 FOXI2Q6ZQN5 318 aa17.22■□□□□ 0.35
VARS-217ENST00000440048 COX7A2P2O60397 106 aa17.21■□□□□ 0.35
VARS-217ENST00000440048 ATF4P18848 351 aaPredicted RBP17.21■□□□□ 0.35
VARS-217ENST00000440048 NHLH2Q02577 135 aa17.21■□□□□ 0.35
VARS-217ENST00000440048 CLEC5AQ9NY25 188 aa17.21■□□□□ 0.35
VARS-217ENST00000440048 PTTG1O95997 202 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 NUTF2P61970 127 aaKnown RBP17.2■□□□□ 0.34
VARS-217ENST00000440048 PRR20EP86478 221 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 PRR20CP86479 221 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 PRR20DP86480 221 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 PRR20BP86481 221 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 PRR20AP86496 221 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 BAXQ07812 192 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 FGL1Q08830 312 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 MIC13Q5XKP0 118 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 CSNK1G2-AS1Q8NCQ2 148 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 PPP1R1CQ8WVI7 109 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 TMEM37Q8WXS4 190 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 SLC25A31Q9H0C2 315 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 RPRMQ9NS64 109 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 RNF24Q9Y225 148 aa17.2■□□□□ 0.34
VARS-217ENST00000440048 TRAV8-2A0A0B4J237 113 aa17.19■□□□□ 0.34
VARS-217ENST00000440048 F6UB75 175 aa17.19■□□□□ 0.34
VARS-217ENST00000440048 IGKV3-20P01619 116 aa17.19■□□□□ 0.34
VARS-217ENST00000440048 IGFL4Q6B9Z1 124 aa17.19■□□□□ 0.34
VARS-217ENST00000440048 ALG5Q9Y673 324 aa17.19■□□□□ 0.34
VARS-217ENST00000440048 ELOA3CA0A087WX78 387 aaPredicted RBP17.18■□□□□ 0.34
VARS-217ENST00000440048 LCE6AA0A183 80 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 MRPS12O15235 138 aaKnown RBP17.18■□□□□ 0.34
VARS-217ENST00000440048 FGF7P21781 194 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 OPCMLQ14982 345 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 C10orf113Q5VZT2 155 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 SPATA31B1PQ5VZV4 182 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 EBLN2Q6P2I7 272 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 Q6ZRG5 221 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 RNF126Q9BV68 326 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 C11orf68Q9H3H3 251 aaKnown RBP17.18■□□□□ 0.34
VARS-217ENST00000440048 XCL2Q9UBD3 114 aa17.18■□□□□ 0.34
VARS-217ENST00000440048 A0A087X0K7 114 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 A0A0J9YX75 114 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 RPL29P47914 159 aaKnown RBP17.17■□□□□ 0.34
VARS-217ENST00000440048 PMS2P11Q13670 270 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 MORN5Q5VZ52 161 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 OR4B1Q8NGF8 309 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 OR5C1Q8NGR4 320 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 CHAC2Q8WUX2 184 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 CLUHP3Q96NS8 147 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 C1QTNF4Q9BXJ3 329 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 DNAJC4Q9NNZ3 241 aa17.17■□□□□ 0.34
VARS-217ENST00000440048 ZNF705EA8MWA4 302 aaPredicted RBP17.16■□□□□ 0.34
VARS-217ENST00000440048 DEFB4AO15263 64 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 MPC2O95563 127 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 FAM78BQ5VT40 261 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 RNF182Q8N6D2 247 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 Q8NAQ8 132 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 SLC39A9Q9NUM3 307 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 X6R8D5 127 aa17.16■□□□□ 0.34
VARS-217ENST00000440048 SACSQ9NZJ4 4579 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 CXorf65A6NEN9 183 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 MPDU1O75352 247 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 FXYD7P58549 80 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 B2MP61769 119 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 OR1L4Q8NGR5 311 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 PXMP4Q9Y6I8 212 aa17.15■□□□□ 0.34
VARS-217ENST00000440048 CLINT1Q14677 625 aa17.14■□□□□ 0.33
VARS-217ENST00000440048 PFDN5Q99471 154 aa17.14■□□□□ 0.33
VARS-217ENST00000440048 IGHV4-28A0A0C4DH34 117 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 PET100P0DJ07 73 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 MIFP14174 115 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms