RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 LYZL2Q7Z4W2 148 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 S100A7AQ86SG5 101 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 BPIFCQ8NFQ6 507 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 GPR82Q96P67 336 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 TRGV9Q99603 122 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 ATG101Q9BSB4 218 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 TMEM147Q9BVK8 224 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 WDR12Q9GZL7 423 aaKnown RBP5.56□□□□□ -1.52
VPS50-204ENST00000438395 SLC25A22Q9H936 323 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 KIAA1109Q2LD37 5005 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 IGLV2-18A0A075B6J9 118 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 FABP12A6NFH5 140 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 INSP01308 110 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 DEFB1P60022 68 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 GDF5OSQ5U4N7 250 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 GSG1LQ6UXU4 331 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 BCL7BQ9BQE9 202 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 KRTAP17-1Q9BYP8 105 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 SLC35B3Q9H1N7 401 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 PPP1R14DQ9NXH3 145 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 DOK5Q9P104 306 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
VPS50-204ENST00000438395 YTHDF2Q9Y5A9 579 aaKnown RBP5.55□□□□□ -1.52
VPS50-204ENST00000438395 VPS13DQ5THJ4 4388 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 A0A0J9YX75 114 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 WRBO00258 174 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 DUSP14O95147 198 aaKnown RBP5.54□□□□□ -1.52
VPS50-204ENST00000438395 ORM2P19652 201 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 TMBIM6P55061 237 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 PAX9P55771 341 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 RAP2BP61225 183 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 FGL1Q08830 312 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 ZNF79Q15937 498 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 LGALS9BQ3B8N2 356 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 PYDC2Q56P42 97 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 TOMM5Q8N4H5 51 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 ZNF709Q8N972 641 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 ZNF738Q8NE65 137 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 OR1B1Q8NGR6 318 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 MCFD2Q8NI22 146 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 IGF2BP2-AS1Q96M15 143 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 RSG1Q9BU20 258 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 SCRT1Q9BWW7 348 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 SLC45A2Q9UMX9 530 aa5.54□□□□□ -1.52
VPS50-204ENST00000438395 IGKV1D-37A0A075B6S9 117 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 F6UB75 175 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 SOCS3O14543 225 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 SYNGR2O43760 224 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 SLC25A6P12236 298 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 S100A5P33763 92 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 ALDH3B2P48448 385 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 INPP1P49441 399 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 B2MP61769 119 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 OXA1LQ15070 435 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 RNF212Q495C1 297 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 SPANXN5Q5MJ07 72 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 TMEM88Q6PEY1 159 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 THAP8Q8NA92 274 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 OR4D5Q8NGN0 318 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 LRRC20Q8TCA0 184 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 DYNC2LI1Q8TCX1 351 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 SLC25A21Q9BQT8 299 aaPredicted RBP5.53□□□□□ -1.52
VPS50-204ENST00000438395 SLC25A32Q9H2D1 315 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 RNF24Q9Y225 148 aa5.53□□□□□ -1.52
VPS50-204ENST00000438395 STRAPQ9Y3F4 350 aaKnown RBP5.53□□□□□ -1.52
VPS50-204ENST00000438395 RYR1P21817 5038 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 ZNF98A6NK75 572 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 H3BP45 60 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 BOLA2-SMG1P6H3BVE0 249 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 M0R2Z0 102 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 RTL8CO15255 209 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 IL5P05113 134 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 HOXB5P09067 269 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 DEFB130BP0DP73 79 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 DEFB130AP0DP74 79 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 RPL7P18124 248 aaKnown RBP5.52□□□□□ -1.53
VPS50-204ENST00000438395 TNFSF8P32971 234 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 CNN1P51911 297 aaKnown RBP5.52□□□□□ -1.53
VPS50-204ENST00000438395 FAM3BP58499 235 aaPredicted RBP5.52□□□□□ -1.53
VPS50-204ENST00000438395 RHOBP62745 196 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 HIST1H1AQ02539 215 aaPredicted RBP5.52□□□□□ -1.53
VPS50-204ENST00000438395 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 C1orf134Q5TEV5 83 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 ACOT7LQ6ZUV0 252 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
VPS50-204ENST00000438395 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 PITX3O75364 302 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 HYPMO75409 117 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 OR5G3P0C626 314 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 SELENOTP62341 195 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 PPP1R1AQ13522 171 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 CLINT1Q14677 625 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 BAP18Q8IXM2 172 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms