RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 PXMP4Q9Y6I8 212 aa17.62■□□□□ 0.41
RBFOX2-209ENST00000438146 RPL29P47914 159 aaKnown RBP17.61■□□□□ 0.41
RBFOX2-209ENST00000438146 C10orf113Q5VZT2 155 aa17.61■□□□□ 0.41
RBFOX2-209ENST00000438146 LINC00052Q96N35 136 aa17.61■□□□□ 0.41
RBFOX2-209ENST00000438146 ATP5SQ99766 215 aa17.61■□□□□ 0.41
RBFOX2-209ENST00000438146 MPDU1O75352 247 aa17.6■□□□□ 0.41
RBFOX2-209ENST00000438146 SNRPD3P62318 126 aaKnown RBP17.6■□□□□ 0.41
RBFOX2-209ENST00000438146 FGL1Q08830 312 aa17.6■□□□□ 0.41
RBFOX2-209ENST00000438146 APOC4P55056 127 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 ACTL10Q5JWF8 245 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 MORN5Q5VZ52 161 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 S100A7AQ86SG5 101 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 C17orf77Q96MU5 243 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 GPR82Q96P67 336 aa17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 WDR61Q9GZS3 305 aaKnown RBP17.59■□□□□ 0.41
RBFOX2-209ENST00000438146 SOCS3O14543 225 aa17.58■□□□□ 0.4
RBFOX2-209ENST00000438146 DEFB1P60022 68 aa17.58■□□□□ 0.4
RBFOX2-209ENST00000438146 OR2T35Q8NGX2 323 aa17.58■□□□□ 0.4
RBFOX2-209ENST00000438146 DNAJC4Q9NNZ3 241 aa17.58■□□□□ 0.4
RBFOX2-209ENST00000438146 HUWE1Q7Z6Z7 4374 aaKnown RBP17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 ELOA3CA0A087WX78 387 aaPredicted RBP17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 SNRPCP09234 159 aaKnown RBP17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 RPL7P18124 248 aaKnown RBP17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 ATF4P18848 351 aaPredicted RBP17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 ID1P41134 155 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 STHQ8IWL8 128 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 OR1L4Q8NGR5 311 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 CHAC2Q8WUX2 184 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 ASB13Q8WXK3 278 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 C16orf92Q96LL3 132 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 WFDC1Q9HC57 220 aa17.57■□□□□ 0.4
RBFOX2-209ENST00000438146 GCSAMLQ5JQS6 135 aa17.56■□□□□ 0.4
RBFOX2-209ENST00000438146 ZNF709Q8N972 641 aa17.56■□□□□ 0.4
RBFOX2-209ENST00000438146 FXYD6-FXYD2A0A087WZ82 144 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 TRAV5A0A0B4J249 113 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 IFNA5P01569 189 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 PSMB3P49720 205 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 IGFL4Q6B9Z1 124 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 PFDN5Q99471 154 aa17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 SEPSECSQ9HD40 501 aaKnown RBP17.55■□□□□ 0.4
RBFOX2-209ENST00000438146 MEOX2P50222 304 aa17.54■□□□□ 0.4
RBFOX2-209ENST00000438146 DEFB135Q30KP9 77 aa17.54■□□□□ 0.4
RBFOX2-209ENST00000438146 SCGB1C1Q8TD33 95 aa17.54■□□□□ 0.4
RBFOX2-209ENST00000438146 C20orf173Q96LM9 149 aa17.54■□□□□ 0.4
RBFOX2-209ENST00000438146 CSTL1Q9H114 145 aa17.54■□□□□ 0.4
RBFOX2-209ENST00000438146 KIR2DL5BA0A0G2JN68 375 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 KIR2DL5BA0A0G2JPC4 375 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 SMLR1H3BR10 107 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 ISLRO14498 428 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 TRPT1Q86TN4 253 aaKnown RBP17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 KIR2DL5AQ8N109 375 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 KIR2DL5BQ8NHK3 375 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 NBEAL2Q6ZNJ1 2754 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 C17orf112F2Z3M2 114 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 H3BTX0 84 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 MRPS12O15235 138 aaKnown RBP17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 AQP10Q96PS8 301 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 RNF24Q9Y225 148 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 RFNGQ9Y644 331 aa17.53■□□□□ 0.4
RBFOX2-209ENST00000438146 TENM3Q9P273 2699 aa17.52■□□□□ 0.4
RBFOX2-209ENST00000438146 GDF5OSQ5U4N7 250 aa17.52■□□□□ 0.39
RBFOX2-209ENST00000438146 RNF182Q8N6D2 247 aa17.52■□□□□ 0.39
RBFOX2-209ENST00000438146 GATAD1Q8WUU5 269 aa17.52■□□□□ 0.39
RBFOX2-209ENST00000438146 OVOL2Q9BRP0 275 aa17.52■□□□□ 0.39
RBFOX2-209ENST00000438146 TRAV8-2A0A0B4J237 113 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 F6UB75 175 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 G3V3Q6 166 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 UBE2CO00762 179 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 CA1P00915 261 aaPredicted RBP17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 SAMD13Q5VXD3 122 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 BPIFA4PQ86YQ2 179 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 KCNIP2Q9NS61 270 aa17.51■□□□□ 0.39
RBFOX2-209ENST00000438146 A0A087X0K7 114 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 IGKV3-20P01619 116 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 PRB4P10163 310 aaPredicted RBP17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 HLA-DMBP28068 263 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 FAM78BQ5VT40 261 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 SPATA31B1PQ5VZV4 182 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 INO80EQ8NBZ0 244 aaPredicted RBP17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 LRRC20Q8TCA0 184 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 WWC2-AS2Q96NR7 200 aa17.5■□□□□ 0.39
RBFOX2-209ENST00000438146 SPRY2O43597 315 aa17.49■□□□□ 0.39
RBFOX2-209ENST00000438146 FFAR4Q5NUL3 377 aa17.49■□□□□ 0.39
RBFOX2-209ENST00000438146 Q6ZWC4 215 aa17.49■□□□□ 0.39
RBFOX2-209ENST00000438146 TNFSF18Q9UNG2 199 aa17.49■□□□□ 0.39
RBFOX2-209ENST00000438146 RNF222A6NCQ9 220 aa17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 H3BMM0 161 aa17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 FOXI2Q6ZQN5 318 aa17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 MIR17HGQ75NE6 70 aa17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 SAV1Q9H4B6 383 aaPredicted RBP17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 RPRMQ9NS64 109 aa17.48■□□□□ 0.39
RBFOX2-209ENST00000438146 H3BQ15 152 aa17.47■□□□□ 0.39
RBFOX2-209ENST00000438146 HLA-DRB4P13762 266 aa17.47■□□□□ 0.39
RBFOX2-209ENST00000438146 C4BPBP20851 252 aa17.47■□□□□ 0.39
RBFOX2-209ENST00000438146 RNF183Q96D59 192 aa17.47■□□□□ 0.39
RBFOX2-209ENST00000438146 HLA-DRB4X5D2U9 266 aa17.47■□□□□ 0.39
RBFOX2-209ENST00000438146 ARPC5O15511 151 aa17.46■□□□□ 0.39
RBFOX2-209ENST00000438146 IGLC2P0DOY2 106 aa17.46■□□□□ 0.39
RBFOX2-209ENST00000438146 EBLN2Q6P2I7 272 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms