RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GDF5OSQ5U4N7 250 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 GSG1LQ6UXU4 331 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 BCL7BQ9BQE9 202 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 KRTAP17-1Q9BYP8 105 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 SLC35B3Q9H1N7 401 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 PPP1R14DQ9NXH3 145 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 DOK5Q9P104 306 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 YTHDF2Q9Y5A9 579 aaKnown RBP5.55□□□□□ -1.52
VPS50-203ENST00000436177 VPS13DQ5THJ4 4388 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 A0A0J9YX75 114 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 WRBO00258 174 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 DUSP14O95147 198 aaKnown RBP5.54□□□□□ -1.52
VPS50-203ENST00000436177 MED14OSP0DP75 135 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 ORM2P19652 201 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 TMBIM6P55061 237 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 PAX9P55771 341 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 RAP2BP61225 183 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 FGL1Q08830 312 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 ZNF79Q15937 498 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 LGALS9BQ3B8N2 356 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 PYDC2Q56P42 97 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 TOMM5Q8N4H5 51 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 ZNF709Q8N972 641 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 ZNF738Q8NE65 137 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 OR1B1Q8NGR6 318 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 MCFD2Q8NI22 146 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 IGF2BP2-AS1Q96M15 143 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 RSG1Q9BU20 258 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 SCRT1Q9BWW7 348 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 SLC45A2Q9UMX9 530 aa5.54□□□□□ -1.52
VPS50-203ENST00000436177 IGKV1D-37A0A075B6S9 117 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 F6UB75 175 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 SOCS3O14543 225 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 SYNGR2O43760 224 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 SLC25A6P12236 298 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 HOXA5P20719 270 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 S100A5P33763 92 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 ALDH3B2P48448 385 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 INPP1P49441 399 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 LINC00310P59036 64 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 B2MP61769 119 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 OXA1LQ15070 435 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 RNF212Q495C1 297 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 SPANXN5Q5MJ07 72 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 TMEM88Q6PEY1 159 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 THAP8Q8NA92 274 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 OR4D5Q8NGN0 318 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 LRRC20Q8TCA0 184 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 DYNC2LI1Q8TCX1 351 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 SLC25A21Q9BQT8 299 aaPredicted RBP5.53□□□□□ -1.52
VPS50-203ENST00000436177 SLC25A32Q9H2D1 315 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 RNF24Q9Y225 148 aa5.53□□□□□ -1.52
VPS50-203ENST00000436177 STRAPQ9Y3F4 350 aaKnown RBP5.53□□□□□ -1.52
VPS50-203ENST00000436177 RYR1P21817 5038 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 ZNF98A6NK75 572 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 H3BP45 60 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 BOLA2-SMG1P6H3BVE0 249 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 M0R2Z0 102 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 RTL8CO15255 209 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 IL5P05113 134 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 HOXB5P09067 269 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 DEFB130BP0DP73 79 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 DEFB130AP0DP74 79 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 RPL7P18124 248 aaKnown RBP5.52□□□□□ -1.53
VPS50-203ENST00000436177 TNFSF8P32971 234 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 CNN1P51911 297 aaKnown RBP5.52□□□□□ -1.53
VPS50-203ENST00000436177 FAM3BP58499 235 aaPredicted RBP5.52□□□□□ -1.53
VPS50-203ENST00000436177 RHOBP62745 196 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 HIST1H1AQ02539 215 aaPredicted RBP5.52□□□□□ -1.53
VPS50-203ENST00000436177 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 C1orf134Q5TEV5 83 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 ACOT7LQ6ZUV0 252 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
VPS50-203ENST00000436177 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 PITX3O75364 302 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 HYPMO75409 117 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 OR5G3P0C626 314 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 SELENOTP62341 195 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 PPP1R1AQ13522 171 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 CLINT1Q14677 625 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 BAP18Q8IXM2 172 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 C1orf158Q8N1D5 194 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 RNF182Q8N6D2 247 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 LRTM2Q8N967 370 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 DEDD2Q8WXF8 326 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 MGAT4CQ9UBM8 478 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
VPS50-203ENST00000436177 IGKV1OR2-108A0A075B7D4 117 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
VPS50-203ENST00000436177 F5H768 121 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 H3BMQ9 156 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 SSSCA1O60232 199 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms