RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 KRTAP10-3P60369 221 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 UBE2L3P68036 154 aaKnown RBP8.65□□□□□ -1.02
LINC00539-203ENST00000434601 ICAM4Q14773 271 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
LINC00539-203ENST00000434601 RARRES2Q99969 163 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 RNF24Q9Y225 148 aa8.65□□□□□ -1.02
LINC00539-203ENST00000434601 IGHV3OR16-8A0A075B7F1 116 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 OR10J4P0C629 311 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 PYYP10082 97 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 GP9P14770 177 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 LEMD1Q68G75 181 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 SUN5Q8TC36 379 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 RXFP4Q8TDU9 374 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 TMEM190Q8WZ59 177 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 FXYD5Q96DB9 178 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 METTL26Q96S19 204 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 OR51M1Q9H341 326 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 TMEM14CQ9P0S9 112 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 ARL2-SNX15V9GYD0 113 aa8.64□□□□□ -1.03
LINC00539-203ENST00000434601 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 A0A087WW49 117 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 C9JQL5 133 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 PAGE4O60829 102 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 HSPB1P04792 205 aaKnown RBP8.63□□□□□ -1.03
LINC00539-203ENST00000434601 ZP3P21754 424 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 S100A1P23297 94 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 CDX1P47902 265 aaPredicted RBP8.63□□□□□ -1.03
LINC00539-203ENST00000434601 UBE2G2P60604 165 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 BPIFA4PQ86YQ2 179 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 C20orf24Q9BUV8 137 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 NOTCH3Q9UM47 2321 aa8.63□□□□□ -1.03
LINC00539-203ENST00000434601 TMEM218A2RU14 115 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 NDUFS6O75380 124 aaKnown RBP8.62□□□□□ -1.03
LINC00539-203ENST00000434601 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
LINC00539-203ENST00000434601 SFTA3P0C7M3 94 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
LINC00539-203ENST00000434601 CRYBB3P26998 211 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
LINC00539-203ENST00000434601 RPEL1Q2QD12 228 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 UNQ9165/PRO28630Q6UXU0 137 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 C18orf65Q6ZTR6 163 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 C1QL4Q86Z23 238 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 KLHL30-AS1Q8NEE0 82 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
LINC00539-203ENST00000434601 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
LINC00539-203ENST00000434601 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
LINC00539-203ENST00000434601 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
LINC00539-203ENST00000434601 IGLC2P0DOY2 106 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 CD28P10747 220 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 NPPCP23582 126 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 ATP5G3P48201 142 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 CD81P60033 236 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 REC114Q7Z4M0 266 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 OR4F17Q8NGA8 305 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 OR4F4Q96R69 305 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 TXNDC17Q9BRA2 123 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 U3KQE9 123 aa8.61□□□□□ -1.03
LINC00539-203ENST00000434601 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 ZNF320A2RRD8 509 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 BUB3O43684 328 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 HIST1H1EP10412 219 aaKnown RBP8.6□□□□□ -1.03
LINC00539-203ENST00000434601 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
LINC00539-203ENST00000434601 DEFB136Q30KP8 78 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 C1orf194Q5T5A4 169 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 C11orf44Q8N8P7 122 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 BLNKQ8WV28 456 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 CITED2Q99967 270 aaPredicted RBP8.6□□□□□ -1.03
LINC00539-203ENST00000434601 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
LINC00539-203ENST00000434601 UFC1Q9Y3C8 167 aa8.6□□□□□ -1.03
LINC00539-203ENST00000434601 TSSC4Q9Y5U2 329 aaPredicted RBP8.6□□□□□ -1.03
LINC00539-203ENST00000434601 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 IGHV3-66A0A0C4DH42 116 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 A8MWP6 167 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 GGTLC3B5MD39 225 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 F6UZH7 168 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 F8W036 122 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 LINC01619G3V211 115 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 H3BQ15 152 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 K7EMT4 169 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 PDE6DO43924 150 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
LINC00539-203ENST00000434601 NBEAP1P0C6P0 100 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms