RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
PRKDC-203ENST00000432581 C17orf77Q96MU5 243 aa10.47□□□□□ -0.73
PRKDC-203ENST00000432581 TMEM147Q9BVK8 224 aa10.47□□□□□ -0.73
PRKDC-203ENST00000432581 RSL24D1Q9UHA3 163 aaKnown RBP10.47□□□□□ -0.73
PRKDC-203ENST00000432581 CRXO43186 299 aaPredicted RBP10.46□□□□□ -0.73
PRKDC-203ENST00000432581 ORM2P19652 201 aa10.46□□□□□ -0.73
PRKDC-203ENST00000432581 SPCS2Q15005 226 aa10.46□□□□□ -0.73
PRKDC-203ENST00000432581 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.73
PRKDC-203ENST00000432581 HSPG2P98160 4391 aa10.46□□□□□ -0.74
PRKDC-203ENST00000432581 NACAE9PAV3 2078 aa10.46□□□□□ -0.74
PRKDC-203ENST00000432581 F5H768 121 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 NUDT3O95989 172 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 ATP5G1P05496 136 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 ATP5G3P48201 142 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 CCL18P55774 89 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 TMEM128Q5BJH2 165 aa10.45□□□□□ -0.74
PRKDC-203ENST00000432581 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
PRKDC-203ENST00000432581 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 BOLA2-SMG1P6H3BVE0 249 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 PRM2P04554 102 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 FAUP35544 74 aaKnown RBP10.44□□□□□ -0.74
PRKDC-203ENST00000432581 AKR1C1Q04828 323 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 BAP18Q8IXM2 172 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 TMEM256Q8N2U0 113 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
PRKDC-203ENST00000432581 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 CBY3A6NI87 242 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 SYNGR2O43760 224 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 RPL7P18124 248 aaKnown RBP10.43□□□□□ -0.74
PRKDC-203ENST00000432581 GATA2P23769 480 aaPredicted RBP10.43□□□□□ -0.74
PRKDC-203ENST00000432581 TAS2R60P59551 318 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 FGL1Q08830 312 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 TMED4Q7Z7H5 227 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 ZNF738Q8NE65 137 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 MRPS26Q9BYN8 205 aaKnown RBP10.43□□□□□ -0.74
PRKDC-203ENST00000432581 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
PRKDC-203ENST00000432581 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 H3BRN7 92 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 WRBO00258 174 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 AZU1P20160 251 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 VAMP1P23763 118 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 RAP2BP61225 183 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 CLINT1Q14677 625 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 TMEM182Q6ZP80 229 aaPredicted RBP10.42□□□□□ -0.74
PRKDC-203ENST00000432581 DYNC2LI1Q8TCX1 351 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 LINC01587Q99440 93 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 SLC25A39Q9BZJ4 359 aaPredicted RBP10.42□□□□□ -0.74
PRKDC-203ENST00000432581 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
PRKDC-203ENST00000432581 AP3S2P59780 193 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 RHOBP62745 196 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 HIST1H1AQ02539 215 aaPredicted RBP10.41□□□□□ -0.74
PRKDC-203ENST00000432581 FCN2Q15485 313 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 ACOT7LQ6ZUV0 252 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 RAB2BQ8WUD1 216 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 BCL7BQ9BQE9 202 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
PRKDC-203ENST00000432581 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
PRKDC-203ENST00000432581 TIMM8BQ9Y5J9 83 aaPredicted RBP10.41□□□□□ -0.74
PRKDC-203ENST00000432581 FABP12A6NFH5 140 aa10.4□□□□□ -0.74
PRKDC-203ENST00000432581 IL5P05113 134 aa10.4□□□□□ -0.74
PRKDC-203ENST00000432581 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
PRKDC-203ENST00000432581 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
PRKDC-203ENST00000432581 SLC25A21Q9BQT8 299 aaPredicted RBP10.4□□□□□ -0.74
PRKDC-203ENST00000432581 A0A087X0K7 114 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 H3BP45 60 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 HYPMO75409 117 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 SFT2D2O95562 160 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 HTN1P15515 57 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 CXCL3P19876 107 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 PLP1P60201 277 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 SELENOTP62341 195 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 PSG3Q16557 428 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 OR10J6PQ8NGY7 276 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 LRRC20Q8TCA0 184 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
PRKDC-203ENST00000432581 HOXB5P09067 269 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 TNFSF8P32971 234 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 CDKN1BP46527 198 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 TMBIM6P55061 237 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 Q8N1X5 172 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
PRKDC-203ENST00000432581 Q9H8V8 135 aa10.38□□□□□ -0.75
PRKDC-203ENST00000432581 H7BYZ3 331 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms