RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
CHFR-203ENST00000432561 Q8N976 141 aa13.11□□□□□ -0.31
CHFR-203ENST00000432561 FMC1Q96HJ9 113 aa13.11□□□□□ -0.31
CHFR-203ENST00000432561 P01737 135 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 COX19Q49B96 90 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
CHFR-203ENST00000432561 TEX43Q6ZNM6 134 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 NIT1Q86X76 327 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 M0QZ24 198 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 FOXA3P55318 350 aaPredicted RBP13.1□□□□□ -0.31
CHFR-203ENST00000432561 PAX2Q02962 417 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 Q86TA4 180 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 RNF5Q99942 180 aa13.1□□□□□ -0.31
CHFR-203ENST00000432561 ODF3BA8MYP8 253 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 IGLV2-11P01706 119 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 FCGR2BP31994 310 aaPredicted RBP13.09□□□□□ -0.31
CHFR-203ENST00000432561 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 WIPF2Q8TF74 440 aaPredicted RBP13.09□□□□□ -0.31
CHFR-203ENST00000432561 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 M0R3E3 92 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 PRTN3P24158 256 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 RNF125Q96EQ8 232 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 C19orf71A6NCJ1 209 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 NDUFA3O95167 84 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 OTORQ9NRC9 128 aa13.09□□□□□ -0.31
CHFR-203ENST00000432561 CEACAM3P40198 252 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 ATOH7Q8N100 152 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 DAZAP1Q96EP5 407 aaKnown RBP13.08□□□□□ -0.32
CHFR-203ENST00000432561 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 SHANK2-AS3Q9BTD1 123 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 IGHV3-35A0A0C4DH35 117 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 GNG7O60262 68 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 COL8A1P27658 744 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 UCNP55089 124 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 RNASEKQ6P5S7 137 aaKnown RBP13.08□□□□□ -0.32
CHFR-203ENST00000432561 NPBQ8NG41 125 aa13.08□□□□□ -0.32
CHFR-203ENST00000432561 ALKBH7Q9BT30 221 aaPredicted RBP13.08□□□□□ -0.32
CHFR-203ENST00000432561 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
CHFR-203ENST00000432561 H3BRN7 92 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 PMCHL1Q16048 86 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 CHRDL1Q9BU40 450 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
CHFR-203ENST00000432561 SPG11Q96JI7 2443 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 A8MWL6 223 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 M0R1W7 72 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 HLA-DRB1P01911 266 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 ZC2HC1AQ96GY0 325 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 F8W735 103 aaPredicted RBP13.06□□□□□ -0.32
CHFR-203ENST00000432561 OR2J3O76001 311 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 HBBP68871 147 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 Q56UQ5 140 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 SIGLEC15Q6ZMC9 328 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 UBTD1Q9HAC8 227 aa13.06□□□□□ -0.32
CHFR-203ENST00000432561 HSBP1O75506 76 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 HOXB4P17483 251 aaPredicted RBP13.05□□□□□ -0.32
CHFR-203ENST00000432561 SSTP61278 116 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 OR4F17Q8NGA8 305 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
CHFR-203ENST00000432561 IGLV11-55A0A075B6I3 123 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
CHFR-203ENST00000432561 NDUFB8O95169 186 aa13.04□□□□□ -0.32
CHFR-203ENST00000432561 SRSF8Q9BRL6 282 aaKnown RBP13.04□□□□□ -0.32
CHFR-203ENST00000432561 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
CHFR-203ENST00000432561 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
CHFR-203ENST00000432561 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 ZNF562Q6V9R5 426 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 M0R2Z0 102 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 TMEM11P17152 192 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
CHFR-203ENST00000432561 BORCS7Q96B45 105 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 TPPP3Q9BW30 176 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 LPAR2Q9HBW0 351 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
CHFR-203ENST00000432561 CRYBG3Q68DQ2 2970 aa13.02□□□□□ -0.32
CHFR-203ENST00000432561 ABCA2Q9BZC7 2435 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms