RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 SMCO1Q147U7 214 aa15.27■□□□□ 0.04
PTPRA-207ENST00000431048 ESRGQ1W209 222 aa15.27■□□□□ 0.04
PTPRA-207ENST00000431048 MZT2AQ6P582 158 aa15.27■□□□□ 0.04
PTPRA-207ENST00000431048 OR10J6PQ8NGY7 276 aa15.27■□□□□ 0.04
PTPRA-207ENST00000431048 MRPS16Q9Y3D3 137 aaKnown RBP15.27■□□□□ 0.04
PTPRA-207ENST00000431048 TRAV12-2A0A075B6T6 113 aa15.26■□□□□ 0.03
PTPRA-207ENST00000431048 H3BNG1 76 aa15.26■□□□□ 0.03
PTPRA-207ENST00000431048 UHRF2Q96PU4 802 aa15.26■□□□□ 0.03
PTPRA-207ENST00000431048 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
PTPRA-207ENST00000431048 KCNIP3Q9Y2W7 256 aa15.26■□□□□ 0.03
PTPRA-207ENST00000431048 TRAV26-1A0A087WT03 109 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 ZNF182P17025 639 aaPredicted RBP15.25■□□□□ 0.03
PTPRA-207ENST00000431048 M6PRP20645 277 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 S100A7P31151 101 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 NCS1P62166 190 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 SSBP1Q04837 148 aaKnown RBP15.25■□□□□ 0.03
PTPRA-207ENST00000431048 TMEM144Q7Z5S9 345 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 LINC00612Q8N6U2 182 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 NOP10Q9NPE3 64 aaKnown RBP15.25■□□□□ 0.03
PTPRA-207ENST00000431048 ZNF586Q9NXT0 402 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 PTTG2Q9NZH5 202 aa15.25■□□□□ 0.03
PTPRA-207ENST00000431048 A0A0B4J2A0 478 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 DLK1P80370 383 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 OR5I1Q13606 314 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 IGFL4Q6B9Z1 124 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 Q6ZRN7 208 aaPredicted RBP15.24■□□□□ 0.03
PTPRA-207ENST00000431048 RNASE8Q8TDE3 154 aaKnown RBP15.24■□□□□ 0.03
PTPRA-207ENST00000431048 SLC25A39Q9BZJ4 359 aaPredicted RBP15.24■□□□□ 0.03
PTPRA-207ENST00000431048 EXTL2Q9UBQ6 330 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 SHPKQ9UHJ6 478 aa15.24■□□□□ 0.03
PTPRA-207ENST00000431048 DISC1C4P0D8 188 aa15.23■□□□□ 0.03
PTPRA-207ENST00000431048 RAB11AP62491 216 aa15.23■□□□□ 0.03
PTPRA-207ENST00000431048 CDPF1Q6NVV7 123 aa15.23■□□□□ 0.03
PTPRA-207ENST00000431048 RNF182Q8N6D2 247 aa15.23■□□□□ 0.03
PTPRA-207ENST00000431048 TMEM263Q8WUH6 116 aaKnown RBP15.23■□□□□ 0.03
PTPRA-207ENST00000431048 VCX3AQ9NNX9 186 aa15.23■□□□□ 0.03
PTPRA-207ENST00000431048 ZNF701M0R085 212 aaPredicted RBP15.22■□□□□ 0.03
PTPRA-207ENST00000431048 ADAP1O75689 374 aa15.22■□□□□ 0.03
PTPRA-207ENST00000431048 VBP1P61758 197 aa15.22■□□□□ 0.03
PTPRA-207ENST00000431048 Q5VSD8 79 aa15.22■□□□□ 0.03
PTPRA-207ENST00000431048 FRZBQ92765 325 aa15.22■□□□□ 0.03
PTPRA-207ENST00000431048 ATP6V1G2O95670 118 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 HTN1P15515 57 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 LINC00315P59091 139 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 RHOBP62745 196 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 FAAP20Q6NZ36 180 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 LYZL2Q7Z4W2 148 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 ZNF738Q8NE65 137 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 BPIFCQ8NFQ6 507 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 OR8A1Q8NGG7 326 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 AP3S1Q92572 193 aa15.21■□□□□ 0.03
PTPRA-207ENST00000431048 SRRM2Q9UQ35 2752 aaKnown RBP15.21■□□□□ 0.03
PTPRA-207ENST00000431048 TMEM147Q9BVK8 224 aa15.2■□□□□ 0.02
PTPRA-207ENST00000431048 FUNDC2Q9BWH2 189 aa15.2■□□□□ 0.02
PTPRA-207ENST00000431048 PPP1R14DQ9NXH3 145 aa15.2■□□□□ 0.02
PTPRA-207ENST00000431048 PRR13Q9NZ81 148 aa15.2■□□□□ 0.02
PTPRA-207ENST00000431048 A0A087WXM4 84 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 A0A0J9YY99 117 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 H7BYZ3 331 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 EREGO14944 169 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 AKR1C4P17516 323 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 ORM2P19652 201 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 HOXA5P20719 270 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 MRPS10P82664 201 aaKnown RBP15.19■□□□□ 0.02
PTPRA-207ENST00000431048 HIST1H1AQ02539 215 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-207ENST00000431048 OR1S1Q8NH92 325 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 PRRT1Q99946 306 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 C20orf144Q9BQM9 153 aa15.19■□□□□ 0.02
PTPRA-207ENST00000431048 FLG2Q5D862 2391 aaPredicted RBP15.18■□□□□ 0.02
PTPRA-207ENST00000431048 PITX3O75364 302 aa15.18■□□□□ 0.02
PTPRA-207ENST00000431048 CDKN1BP46527 198 aa15.18■□□□□ 0.02
PTPRA-207ENST00000431048 FGL1Q08830 312 aa15.18■□□□□ 0.02
PTPRA-207ENST00000431048 TMEM182Q6ZP80 229 aaPredicted RBP15.18■□□□□ 0.02
PTPRA-207ENST00000431048 AKAIN1P0CW23 69 aa15.17■□□□□ 0.02
PTPRA-207ENST00000431048 CXCL3P19876 107 aa15.17■□□□□ 0.02
PTPRA-207ENST00000431048 GATA2P23769 480 aaPredicted RBP15.17■□□□□ 0.02
PTPRA-207ENST00000431048 PSG3Q16557 428 aa15.17■□□□□ 0.02
PTPRA-207ENST00000431048 PRSS46E5RG02 174 aa15.16■□□□□ 0.02
PTPRA-207ENST00000431048 H3BRN7 92 aa15.16■□□□□ 0.02
PTPRA-207ENST00000431048 RPL7P18124 248 aaKnown RBP15.16■□□□□ 0.02
PTPRA-207ENST00000431048 SRPXP78539 464 aa15.16■□□□□ 0.02
PTPRA-207ENST00000431048 SCGB3A2Q96PL1 93 aa15.16■□□□□ 0.02
PTPRA-207ENST00000431048 SHANK2-AS3Q9BTD1 123 aa15.16■□□□□ 0.02
PTPRA-207ENST00000431048 A0A087X0K7 114 aa15.15■□□□□ 0.02
PTPRA-207ENST00000431048 PIGBOS1A0A0B4J2F0 54 aa15.15■□□□□ 0.02
PTPRA-207ENST00000431048 ERVFC1-1P60608 527 aa15.15■□□□□ 0.02
PTPRA-207ENST00000431048 OR51S1Q8NGJ8 323 aa15.15■□□□□ 0.02
PTPRA-207ENST00000431048 IAPPP10997 89 aa15.14■□□□□ 0.01
PTPRA-207ENST00000431048 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
PTPRA-207ENST00000431048 CCDC28AQ8IWP9 274 aa15.14■□□□□ 0.01
PTPRA-207ENST00000431048 SMIM4Q8WVI0 70 aa15.14■□□□□ 0.01
PTPRA-207ENST00000431048 GAGE12BA1L429 117 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 GAGE7O76087 117 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 RLN2P04090 185 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 GAGE12FP0CL80 117 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 GAGE12GP0CL81 117 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 GAGE12IP0CL82 117 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 ANXA3P12429 323 aa15.13■□□□□ 0.01
PTPRA-207ENST00000431048 CIB3Q96Q77 187 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-207ENST00000431048 PAIP2BQ9ULR5 123 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms